RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ELANEP08246 267 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 OR13C7P0DN81 318 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 SLC25A4P12235 298 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 AREGP15514 252 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 IGLL1P15814 213 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 CHRNA7P36544 502 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 AP2S1P53680 142 aaPredicted RBP10.75□□□□□ -0.69
TPM4-202ENST00000344824 PAX9P55771 341 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 TMEM267Q0VDI3 215 aaPredicted RBP10.75□□□□□ -0.69
TPM4-202ENST00000344824 FOXE3Q13461 319 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 PDLIM3Q53GG5 364 aaPredicted RBP10.75□□□□□ -0.69
TPM4-202ENST00000344824 C19orf35Q6ZS72 473 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 ZNF546Q86UE3 836 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 NOXA1Q86UR1 476 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 CIB3Q96Q77 187 aaPredicted RBP10.75□□□□□ -0.69
TPM4-202ENST00000344824 C11orf1Q9H5F2 150 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 ZC4H2Q9NQZ6 224 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 IFNA10P01566 189 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 IGHG4P01861 327 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 PRB2P02812 416 aaPredicted RBP10.75□□□□□ -0.69
TPM4-202ENST00000344824 ERHP84090 104 aaKnown RBP10.75□□□□□ -0.69
TPM4-202ENST00000344824 CFHR3Q02985 330 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 WT1-ASQ06250 92 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 SAMD5Q5TGI4 173 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 UNQ5815/PRO19632Q6UWF5 114 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 ETV3LQ6ZN32 361 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 SMIM8Q96KF7 97 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 OR5B12Q96R08 314 aa10.75□□□□□ -0.69
TPM4-202ENST00000344824 IGLC7A0M8Q6 106 aa10.74□□□□□ -0.69
TPM4-202ENST00000344824 LYL1P12980 280 aa10.74□□□□□ -0.69
TPM4-202ENST00000344824 NUP62P37198 522 aaPredicted RBP10.74□□□□□ -0.69
TPM4-202ENST00000344824 P2RY1P47900 373 aa10.74□□□□□ -0.69
TPM4-202ENST00000344824 EIF2B2P49770 351 aaKnown RBP10.74□□□□□ -0.69
TPM4-202ENST00000344824 MRPL41Q8IXM3 137 aaKnown RBP10.74□□□□□ -0.69
TPM4-202ENST00000344824 OR2C3Q8N628 320 aa10.74□□□□□ -0.69
TPM4-202ENST00000344824 LFNGQ8NES3 379 aa10.74□□□□□ -0.69
TPM4-202ENST00000344824 HYLS1Q96M11 299 aa10.74□□□□□ -0.69
TPM4-202ENST00000344824 OR4C12Q96R67 309 aa10.74□□□□□ -0.69
TPM4-202ENST00000344824 STRAPQ9Y3F4 350 aaKnown RBP10.74□□□□□ -0.69
TPM4-202ENST00000344824 IGSF23A1L1A6 192 aa10.73□□□□□ -0.69
TPM4-202ENST00000344824 METTL15P1P0C7V9 234 aa10.73□□□□□ -0.69
TPM4-202ENST00000344824 EGR2P11161 476 aaPredicted RBP10.73□□□□□ -0.69
TPM4-202ENST00000344824 RPL12P30050 165 aaKnown RBP10.73□□□□□ -0.69
TPM4-202ENST00000344824 SNCAP37840 140 aa10.73□□□□□ -0.69
TPM4-202ENST00000344824 BEAN1Q3B7T3 259 aa10.73□□□□□ -0.69
TPM4-202ENST00000344824 INO80EQ8NBZ0 244 aaPredicted RBP10.73□□□□□ -0.69
TPM4-202ENST00000344824 SLC24A4Q8NFF2 622 aa10.73□□□□□ -0.69
TPM4-202ENST00000344824 LYRM2Q9NU23 88 aaPredicted RBP10.73□□□□□ -0.69
TPM4-202ENST00000344824 ZNF580Q9UK33 172 aa10.73□□□□□ -0.69
TPM4-202ENST00000344824 TNFSF18Q9UNG2 199 aa10.73□□□□□ -0.69
TPM4-202ENST00000344824 C15orf62A8K5M9 175 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 TSC22D2O75157 780 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 CST7O76096 145 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 OR8U8P0C7N1 319 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 NPY1RP25929 384 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 PSMB8P28062 276 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 PPIFP30405 207 aaKnown RBP10.72□□□□□ -0.69
TPM4-202ENST00000344824 TAS2R30P59541 319 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 ASPHD1Q5U4P2 390 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 OR8G2PQ6IF36 304 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 LINC00482Q8N8I6 264 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 OR5T1Q8NG75 326 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 RAX2Q96IS3 184 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 MFFQ9GZY8 342 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 KLK15Q9H2R5 256 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 GNB4Q9HAV0 340 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 ZNF355PQ9NSJ1 428 aa10.72□□□□□ -0.69
TPM4-202ENST00000344824 RNF222A6NCQ9 220 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 PRH1P02810 166 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 IFNA4P05014 189 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 RNASE2P10153 161 aaKnown RBP10.71□□□□□ -0.69
TPM4-202ENST00000344824 CXCL2P19875 107 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 MYCNOSP40205 109 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 HTR2BP41595 481 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 RPP30P78346 268 aaKnown RBP10.71□□□□□ -0.69
TPM4-202ENST00000344824 EWSR1Q01844 656 aaKnown RBP eCLIP10.71□□□□□ -0.691e-6■■■□□ 16.2
TPM4-202ENST00000344824 TMEM252Q8N6L7 170 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 TMEM217Q8N7C4 229 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 C4orf3Q8WVX3 66 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 BSCL2Q96G97 398 aaPredicted RBP10.71□□□□□ -0.69
TPM4-202ENST00000344824 RCC1LQ96I51 464 aaKnown RBP10.71□□□□□ -0.69
TPM4-202ENST00000344824 MS4A10Q96PG2 267 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 P2RX4Q99571 388 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 SMIM3Q9BZL3 60 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 SLC25A31Q9H0C2 315 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 U3KQ87 197 aa10.71□□□□□ -0.69
TPM4-202ENST00000344824 TGP01266 2768 aa10.7□□□□□ -0.7
TPM4-202ENST00000344824 HMSDA8MTL9 139 aa10.7□□□□□ -0.7
TPM4-202ENST00000344824 CCL24O00175 119 aa10.7□□□□□ -0.7
TPM4-202ENST00000344824 SOX15O60248 233 aa10.7□□□□□ -0.7
TPM4-202ENST00000344824 DEFA4P12838 97 aa10.7□□□□□ -0.7
TPM4-202ENST00000344824 CDX1P47902 265 aaPredicted RBP10.7□□□□□ -0.7
TPM4-202ENST00000344824 TPPP2P59282 170 aa10.7□□□□□ -0.7
TPM4-202ENST00000344824 RAB11AP62491 216 aa10.7□□□□□ -0.7
TPM4-202ENST00000344824 NHLH2Q02577 135 aa10.7□□□□□ -0.7
TPM4-202ENST00000344824 TMEM14EPQ6UXP3 125 aa10.7□□□□□ -0.7
TPM4-202ENST00000344824 ACOT7LQ6ZUV0 252 aa10.7□□□□□ -0.7
TPM4-202ENST00000344824 HSD17B13Q7Z5P4 300 aaPredicted RBP10.7□□□□□ -0.7
TPM4-202ENST00000344824 STX12Q86Y82 276 aa10.7□□□□□ -0.7
TPM4-202ENST00000344824 RNF152Q8N8N0 203 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms