RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 NDPQ00604 133 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 DEFA5Q01523 94 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 C10orf91Q5T1B1 145 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 TEPPQ6URK8 271 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 MALSU1Q96EH3 234 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 PXMP4Q9Y6I8 212 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 TRAV40A0A0B4J280 105 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 F8W036 122 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 EBI3Q14213 229 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 C5orf64Q2M2E5 130 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 OR2T10Q8NGZ9 312 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 GATAD1Q8WUU5 269 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 RAB24Q969Q5 203 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 TBL2Q9Y4P3 447 aaKnown RBP10.78□□□□□ -0.68
CDC42-202ENST00000344548 TRAV1-1A0A0B4J248 108 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 MAP1LC3B2A6NCE7 125 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 RBFOX3A6NFN3 312 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 NCBP2LA6PVI3 153 aaKnown RBP10.78□□□□□ -0.68
CDC42-202ENST00000344548 MSMBP08118 114 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 LINC00869P0C866 280 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 M6PRP20645 277 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 OPRK1P41145 380 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 CCDC144NLQ6NUI1 221 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 ACY3Q96HD9 319 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 MAP1LC3BQ9GZQ8 125 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 KIAA1456Q9P272 454 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 GNG13Q9P2W3 67 aa10.78□□□□□ -0.68
CDC42-202ENST00000344548 C17orf112F2Z3M2 114 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 ICAM4Q14773 271 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 SLC16A13Q7RTY0 426 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 TMEM144Q7Z5S9 345 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 STPG3Q8N7X2 389 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 SLC39A9Q9NUM3 307 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 HIF1ANQ9NWT6 349 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 SH2D7A6NKC9 451 aaPredicted RBP10.77□□□□□ -0.69
CDC42-202ENST00000344548 ZFP92A6NM28 416 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 OOSP1A8MZH6 123 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 MPDU1O75352 247 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 SCAF4O95104 1147 aaKnown RBP10.77□□□□□ -0.69
CDC42-202ENST00000344548 MAS1LP35410 378 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 CX3CL1P78423 397 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 PRR20EP86478 221 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 PRR20CP86479 221 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 PRR20DP86480 221 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 PRR20BP86481 221 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 PRR20AP86496 221 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 KLF17Q5JT82 389 aaPredicted RBP10.77□□□□□ -0.69
CDC42-202ENST00000344548 SPATA31B1PQ5VZV4 182 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 PVRIGQ6DKI7 326 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 COMMD1Q8N668 190 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 RXFP4Q8TDU9 374 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 MISP3Q96FF7 219 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 SEPSECSQ9HD40 501 aaKnown RBP10.77□□□□□ -0.69
CDC42-202ENST00000344548 SLC45A2Q9UMX9 530 aa10.77□□□□□ -0.69
CDC42-202ENST00000344548 J3QKU1 62 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 CNIH1O95406 144 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 TMEM11P17152 192 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 OR10J1P30954 320 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 B2MP61769 119 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 FXYD3Q14802 87 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 ASPHD1Q5U4P2 390 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 LFNGQ8NES3 379 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 NPIPB3Q92617 1050 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 SLC25A33Q9BSK2 321 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 SEC11CQ9BY50 192 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 GSX1Q9H4S2 264 aaPredicted RBP10.76□□□□□ -0.69
CDC42-202ENST00000344548 C7orf69Q9H7B7 122 aa10.76□□□□□ -0.69
CDC42-202ENST00000344548 CARHSP1Q9Y2V2 147 aaKnown RBP10.76□□□□□ -0.69
CDC42-202ENST00000344548 IGKV1D-37A0A075B6S9 117 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 IGHV1-69DA0A0B4J2H0 117 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 A0A0U1RQK1 487 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 IGHV1-69P01742 117 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 ATP5IP56385 69 aaPredicted RBP10.75□□□□□ -0.69
CDC42-202ENST00000344548 Q8N9W7 124 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 PSMG3-AS1Q96PY0 264 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 PRRC2AP48634 2157 aaKnown RBP10.75□□□□□ -0.69
CDC42-202ENST00000344548 CTXND1A0A1B0GTU2 59 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 FNDC10F2Z333 226 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 ZNF90Q03938 601 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 PEA15Q15121 130 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 ZNF114Q8NC26 417 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 PIFOQ8TCI5 191 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 RNASEH2CQ8TDP1 164 aaKnown RBP10.75□□□□□ -0.69
CDC42-202ENST00000344548 ABHD5Q8WTS1 349 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 HSPB9Q9BQS6 159 aa10.75□□□□□ -0.69
CDC42-202ENST00000344548 F11RQ9Y624 299 aaKnown RBP10.75□□□□□ -0.69
CDC42-202ENST00000344548 BTBD17A6NE02 478 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 RNF223E7ERA6 249 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 HBE1P02100 147 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 EGR2P11161 476 aaPredicted RBP10.74□□□□□ -0.69
CDC42-202ENST00000344548 RPL29P47914 159 aaKnown RBP10.74□□□□□ -0.69
CDC42-202ENST00000344548 NPBWR1P48145 328 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 CDC34P49427 236 aaPredicted RBP10.74□□□□□ -0.69
CDC42-202ENST00000344548 BTN1A1Q13410 526 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 ACOT6Q3I5F7 207 aaPredicted RBP10.74□□□□□ -0.69
CDC42-202ENST00000344548 CACNG8Q8WXS5 425 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 ACTR3CQ9C0K3 210 aaPredicted RBP10.74□□□□□ -0.69
CDC42-202ENST00000344548 WNT10AQ9GZT5 417 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 GCN1Q92616 2671 aaKnown RBP10.74□□□□□ -0.69
CDC42-202ENST00000344548 LOC102723971A0A1B0GUV8 181 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms