RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 CIDEAO60543 219 aa6.53□□□□□ -1.36
KPNA1-201ENST00000344337 SPSB3Q6PJ21 355 aa6.53□□□□□ -1.36
KPNA1-201ENST00000344337 IGKV1-5P01602 117 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 TMEM106BQ9NUM4 274 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 LINC00527Q9UJ94 153 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 SRD5A1P18405 259 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 C3orf36Q3SXR2 165 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 C2orf83Q53S99 150 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 LHFPL1Q86WI0 220 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 CARFQ8N187 725 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 CALYQ9NYX4 217 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 HSPB8Q9UJY1 196 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 IGKV3D-20A0A0C4DH25 116 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 NDUFA2O43678 99 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 UMODP07911 640 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 NTF4P34130 210 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 QRFPP83859 136 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 FAM166AQ6J272 317 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 NDFIP1Q9BT67 221 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 TM2D1Q9BX74 207 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 GOSR1O95249 250 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 LTBRP36941 435 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 NUTF2P61970 127 aaKnown RBP6.52□□□□□ -1.37
KPNA1-201ENST00000344337 AP5S1Q9NUS5 200 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 APOHP02749 345 aaPredicted RBP6.52□□□□□ -1.37
KPNA1-201ENST00000344337 CYC1P08574 325 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 HIST1H1EP10412 219 aaKnown RBP6.52□□□□□ -1.37
KPNA1-201ENST00000344337 PRSS57Q6UWY2 283 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 C1orf122Q6ZSJ8 110 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 CYP2G1PQ6ZSU1 146 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 ZIC4Q8N9L1 334 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 SPSB4Q96A44 273 aa6.52□□□□□ -1.37
KPNA1-201ENST00000344337 LY6HO94772 140 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 TMEM97Q5BJF2 176 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 FDCSPQ8NFU4 85 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 SF3B5Q9BWJ5 86 aaKnown RBP6.51□□□□□ -1.37
KPNA1-201ENST00000344337 PNRC2Q9NPJ4 139 aaKnown RBP6.51□□□□□ -1.37
KPNA1-201ENST00000344337 C5orf67F2Z3F1 127 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 NUPR1O60356 82 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 NDUFA3O95167 84 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 FRMD6-AS1P0C7T7 363 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 PSG1P11464 419 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 SMIM12Q96EX1 92 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 TMEM208Q9BTX3 173 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 CACNA1AO00555 2505 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 IGHV3-64A0A075B6Q5 118 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.51□□□□□ -1.37
KPNA1-201ENST00000344337 LOC390937A0A1W2PQ73 354 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 SMKR1H3BMG3 65 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 NCR2O95944 276 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 SMAGPQ0VAQ4 97 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 SLC25A34Q6PIV7 304 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 IGKV3OR2-268A0A0C4DH90 116 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 APOMO95445 188 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 ADH4P08319 380 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 CA7P43166 264 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 KLF17Q5JT82 389 aaPredicted RBP6.51□□□□□ -1.37
KPNA1-201ENST00000344337 FAM74A4Q5TZK3 123 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 MOB1BQ7L9L4 216 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 EXOC3-AS1Q8N2X6 119 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 OR1L8Q8NGR8 309 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 TXNDC17Q9BRA2 123 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 TP73-AS1Q9UF72 201 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 POLR3KQ9Y2Y1 108 aaPredicted RBP6.51□□□□□ -1.37
KPNA1-201ENST00000344337 FOXI3A8MTJ6 420 aaPredicted RBP6.51□□□□□ -1.37
KPNA1-201ENST00000344337 IGLV3-21P80748 117 aaPredicted RBP6.51□□□□□ -1.37
KPNA1-201ENST00000344337 FOXL1Q12952 345 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 SPANXN1Q5VSR9 72 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 FAM90A2PQ658T7 463 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 TMEM54Q969K7 222 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 FBXL15Q9H469 300 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 IL36BQ9NZH7 164 aa6.51□□□□□ -1.37
KPNA1-201ENST00000344337 YTHDF2Q9Y5A9 579 aaKnown RBP6.51□□□□□ -1.37
KPNA1-201ENST00000344337 DSPP15924 2871 aaKnown RBP6.51□□□□□ -1.37
KPNA1-201ENST00000344337 LINC00473A8K010 186 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 IGKV1D-33P01593 117 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 IGKV1-33P01594 117 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 MPV17L2Q567V2 206 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 JKAMPQ9P055 326 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 A0A1W2PR77 199 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 E9PQ18 207 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 SMIM17P0DL12 118 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 SRSF4Q08170 494 aaKnown RBP6.5□□□□□ -1.37
KPNA1-201ENST00000344337 FOXF2Q12947 444 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 NFAM1Q8NET5 270 aaPredicted RBP6.5□□□□□ -1.37
KPNA1-201ENST00000344337 TMEM170AQ8WVE7 144 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 HIST1H4GQ99525 98 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 MYOZ1Q9NP98 299 aaPredicted RBP6.5□□□□□ -1.37
KPNA1-201ENST00000344337 PRSS2P07478 247 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 FOLR2P14207 255 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 OR4B1Q8NGF8 309 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 IGHV3OR16-12A0A075B7B8 117 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 IGKV1-6A0A0C4DH72 117 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 IGHMP01871 453 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 MIEN1Q9BRT3 115 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 SCRT1Q9BWW7 348 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 ID3Q02535 119 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 ZNF726P1Q15940 193 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 C10orf35Q96D05 121 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 BOD1L1Q8NFC6 3051 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms