RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 COL4A1P02462 1669 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 FAM27BQ5VT28 67 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 PHLDA3Q9Y5J5 127 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 A0A1B0GUS0 222 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 NABP2Q9BQ15 211 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 THSD7AQ9UPZ6 1657 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 THY1P04216 161 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 IGLC2P0DOY2 106 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 IGLC3P0DOY3 106 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 IFITM1P13164 125 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 UNQ6494/PRO21346Q6UXR6 183 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 MYF5P13349 255 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 TNFRSF1AP19438 455 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 SUPT4H1P63272 117 aaKnown RBP11.56□□□□□ -0.56
TRIO-202ENST00000344204 C10orf128Q5T292 105 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 TNFRSF19Q9NS68 423 aa11.56□□□□□ -0.56
TRIO-202ENST00000344204 RAMP3O60896 148 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 WFDC3Q8IUB2 231 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 SCGB3A1Q96QR1 104 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 ZNF146Q15072 292 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 F8W1H4 67 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 SPRY3O43610 288 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 PPP1R17O96001 155 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 WFDC8Q8IUA0 241 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 EPDR1Q9UM22 224 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 Q0VG73 95 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 PROCRQ9UNN8 238 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 TRBV20OR9-2A0A075B6H5 130 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 IGHV2OR16-5A0A0B4J2B6 119 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 CD27P26842 260 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 IFI27L1Q96BM0 104 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 C9orf50Q5SZB4 431 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 FAM90A2PQ658T7 463 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 FBXL7Q9UJT9 491 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 IGKV1D-42A0A075B6H8 117 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 NPIPB13A6NJU9 1138 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 NPIPB4C9JG80 1138 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 LDLRAD1Q5T700 205 aa11.55□□□□□ -0.56
TRIO-202ENST00000344204 IL11P20809 199 aa11.54□□□□□ -0.56
TRIO-202ENST00000344204 SONP18583 2426 aaKnown RBP11.54□□□□□ -0.56
TRIO-202ENST00000344204 TM4SF19Q96DZ7 209 aa11.54□□□□□ -0.56
TRIO-202ENST00000344204 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.54□□□□□ -0.56
TRIO-202ENST00000344204 NAPSAO96009 420 aa11.54□□□□□ -0.56
TRIO-202ENST00000344204 C9orf153Q5TBE3 101 aa11.54□□□□□ -0.56
TRIO-202ENST00000344204 ONECUT1Q9UBC0 465 aa11.54□□□□□ -0.56
TRIO-202ENST00000344204 FAM53AQ6NSI3 398 aaPredicted RBP11.54□□□□□ -0.56
TRIO-202ENST00000344204 C9JCJ5 164 aa11.54□□□□□ -0.56
TRIO-202ENST00000344204 RNASE1P07998 156 aaKnown RBP11.54□□□□□ -0.56
TRIO-202ENST00000344204 R3HDMLQ9H3Y0 253 aa11.54□□□□□ -0.56
TRIO-202ENST00000344204 NDUFB3O43676 98 aa11.54□□□□□ -0.56
TRIO-202ENST00000344204 APELAP0DMC3 54 aa11.54□□□□□ -0.56
TRIO-202ENST00000344204 HSPE1P61604 102 aaKnown RBP11.54□□□□□ -0.56
TRIO-202ENST00000344204 FHL5Q5TD97 284 aa11.54□□□□□ -0.56
TRIO-202ENST00000344204 IGKCP01834 107 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 SH2D7A6NKC9 451 aaPredicted RBP11.53□□□□□ -0.56
TRIO-202ENST00000344204 KIR2DL4Q99706 377 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 SPINK2P20155 84 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 CTGFP29279 349 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 A0A087WV48 116 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 NKX2-8O15522 239 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 TMEM170BQ5T4T1 132 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 COQ2Q96H96 371 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 A0A1W2PS18 150 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 ZDHHC16Q969W1 377 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 ANKHD1Q8IWZ3 2542 aaKnown RBP11.53□□□□□ -0.56
TRIO-202ENST00000344204 ZNF562Q6V9R5 426 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 CIARTQ8N365 385 aaPredicted RBP11.53□□□□□ -0.56
TRIO-202ENST00000344204 DRAM1Q8N682 238 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 OR4A5Q8NH83 315 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 KLF13Q9Y2Y9 288 aaPredicted RBP11.53□□□□□ -0.56
TRIO-202ENST00000344204 A0A1W2PRD5 423 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 A0A1W2PRF3 423 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 A0A1W2PRM7 423 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 ANKRD39Q53RE8 183 aa11.53□□□□□ -0.56
TRIO-202ENST00000344204 GAGE12JA6NER3 117 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 GAGE7O76087 117 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 GAGE12FP0CL80 117 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 GAGE12GP0CL81 117 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 GAGE12IP0CL82 117 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 SRD5A2P31213 254 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 GAGE4Q13068 117 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 C16orf47Q6ZP98 133 aaPredicted RBP11.52□□□□□ -0.56
TRIO-202ENST00000344204 VKORC1L1Q8N0U8 176 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 PAPPA2Q9BXP8 1791 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 TNFRSF6BO95407 300 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 PAPPA-AS1Q5QFB9 102 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 SLC25A47Q6Q0C1 308 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 SMPXQ9UHP9 88 aa11.52□□□□□ -0.56
TRIO-202ENST00000344204 GAGE5Q13069 117 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 GAGE6Q13070 117 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 KLF17Q5JT82 389 aaPredicted RBP11.52□□□□□ -0.57
TRIO-202ENST00000344204 C17orf99Q6UX52 265 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 OR5AN1Q8NGI8 311 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 PRTN3P24158 256 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 KIR3DL3Q8N743 410 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 VKORC1Q9BQB6 163 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 TMUB1Q9BVT8 246 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 C9orf40Q8IXQ3 194 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 IGHV2-26A0A0B4J1V2 119 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms