RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 SLC25A15Q9Y619 301 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 CROCCQ5TZA2 2017 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 ZNF503-AS2A6NEH8 195 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 UBE2CO00762 179 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 ZNRD1Q9P1U0 126 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 ATP5IP56385 69 aaPredicted RBP7.16□□□□□ -1.26
FGD6-201ENST00000343958 RNASEH2CQ8TDP1 164 aaKnown RBP7.16□□□□□ -1.26
FGD6-201ENST00000343958 LIME1Q9H400 295 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 CEACAM1P13688 526 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 OR1N2Q8NGR9 330 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 TMEM70Q9BUB7 260 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 TMEM133Q9H2Q1 129 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 EPDR1Q9UM22 224 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 M0R3E3 92 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 PPIFP30405 207 aaKnown RBP7.16□□□□□ -1.26
FGD6-201ENST00000343958 OR10AG1Q8NH19 301 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 GAFA1Q96PS6 74 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 DUX5Q96PT3 197 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 CCL19Q99731 98 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 LINC00527Q9UJ94 153 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 LYL1P12980 280 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 C1orf147Q96MC9 270 aaPredicted RBP7.16□□□□□ -1.26
FGD6-201ENST00000343958 PARD6GQ9BYG4 376 aaPredicted RBP7.16□□□□□ -1.26
FGD6-201ENST00000343958 TMEM200BQ69YZ2 307 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 TMEM136Q6ZRR5 245 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 RPP25LQ8N5L8 163 aaKnown RBP7.16□□□□□ -1.26
FGD6-201ENST00000343958 NEUROG1Q92886 237 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 ASCL2Q99929 193 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 NRN1Q9NPD7 142 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 TIMM23O14925 209 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 FMC1Q96HJ9 113 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 OTORQ9NRC9 128 aa7.16□□□□□ -1.26
FGD6-201ENST00000343958 SPSB3Q6PJ21 355 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 HIST3H2BBQ8N257 126 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 C9JCJ5 164 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 NTF4P34130 210 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 DLX6P56179 175 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 FAM106AQ4KMX7 169 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 MGST2Q99735 147 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 PHLDA3Q9Y5J5 127 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 IGKV1D-17A0A075B6S4 117 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 A1L4Q6 167 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 STAG3L2P0CL84 134 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 STAG3L3P0CL85 134 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 TAS2R60P59551 318 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 ZNF585BQ52M93 769 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 TEX38Q6PEX7 206 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 ASCL4Q6XD76 172 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 CACNG8Q8WXS5 425 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 TMEM160Q9NX00 188 aa7.15□□□□□ -1.26
FGD6-201ENST00000343958 TCRBV4S1A1TA0A5B7 111 aa7.15□□□□□ -1.27
FGD6-201ENST00000343958 SEPSECSQ9HD40 501 aaKnown RBP7.15□□□□□ -1.27
FGD6-201ENST00000343958 SRRM5B3KS81 715 aa7.15□□□□□ -1.27
FGD6-201ENST00000343958 SMAD7O15105 426 aaKnown RBP7.15□□□□□ -1.27
FGD6-201ENST00000343958 RPUSD1Q9UJJ7 312 aaKnown RBP7.15□□□□□ -1.27
FGD6-201ENST00000343958 RALGAPA2Q2PPJ7 1873 aa7.15□□□□□ -1.27
FGD6-201ENST00000343958 COTL1Q14019 142 aa7.15□□□□□ -1.27
FGD6-201ENST00000343958 HAX1O00165 279 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 GLMPQ8WWB7 406 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 NEU4Q8WWR8 484 aaPredicted RBP7.14□□□□□ -1.27
FGD6-201ENST00000343958 M0R381 172 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 LYPD2Q6UXB3 125 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 TMEM14EPQ6UXP3 125 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 SYT8Q8NBV8 401 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 WFDC12Q8WWY7 111 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 HIGD1CA8MV81 97 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 SAPCD1Q5SSQ6 148 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 RNASE6Q93091 150 aaKnown RBP7.14□□□□□ -1.27
FGD6-201ENST00000343958 PSME4Q14997 1843 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 NBR2O15453 112 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 GZMBP10144 247 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 HIST1H4GQ99525 98 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 PSG8Q9UQ74 426 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 NUDT10Q8NFP7 164 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 NUDT11Q96G61 164 aa7.14□□□□□ -1.27
FGD6-201ENST00000343958 ZNF56Q15929 161 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 LYRM7Q5U5X0 104 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 RPRMLQ8N4K4 120 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 HIST1H2BLQ99880 126 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 IGFL4Q6B9Z1 124 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 FOXC2Q99958 501 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 COL25A1Q9BXS0 654 aaPredicted RBP7.13□□□□□ -1.27
FGD6-201ENST00000343958 PRRC2BQ5JSZ5 2229 aaKnown RBP7.13□□□□□ -1.27
FGD6-201ENST00000343958 AMBPP02760 352 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 ANAPC10Q9UM13 185 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 LOC107984156A0A0G2JMH3 177 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 A0A1B0GW64 132 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 DUX4L9Q6RFH8 374 aaPredicted RBP7.13□□□□□ -1.27
FGD6-201ENST00000343958 CENPVQ7Z7K6 275 aaPredicted RBP7.13□□□□□ -1.27
FGD6-201ENST00000343958 ARL17AQ8IVW1 177 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 OSTCQ9NRP0 149 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 FAM71F2Q6NXP2 309 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 FER1L6-AS1Q8NA97 138 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 TRAV8-6A0A0B4J262 113 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 C15orf62A8K5M9 175 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 CIDEAO60543 219 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 THBDP07204 575 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 SPACA3Q8IXA5 215 aa7.13□□□□□ -1.27
FGD6-201ENST00000343958 RNASE4P34096 147 aaKnown RBP7.13□□□□□ -1.27
FGD6-201ENST00000343958 LY6DQ14210 128 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms