RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 IFI27L2Q9H2X8 130 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 C3orf79P0CE67 100 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 APELAP0DMC3 54 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 ESDP10768 282 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 MRPL14Q6P1L8 145 aaKnown RBP3.99□□□□□ -1.77
CSMD3-203ENST00000343508 GFRA4Q9GZZ7 299 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 R4GN57 208 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 WNT9BO14905 357 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 FCGR2BP31994 310 aaPredicted RBP3.99□□□□□ -1.77
CSMD3-203ENST00000343508 ZNRF1Q8ND25 227 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 PSG7Q13046 419 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 COA6Q5JTJ3 125 aaKnown RBP3.99□□□□□ -1.77
CSMD3-203ENST00000343508 MUC15Q8N387 334 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 COPS9Q8WXC6 57 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 LOC102723996A0A087X1L8 192 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 IGKV1-5P01602 117 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 PLAURQ03405 335 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 HES3Q5TGS1 186 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 RNF144BQ7Z419 303 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 GGTLC1Q9BX51 225 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 CST9LQ9H4G1 147 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 KBTBD11-OT1A0A1B0GTJ5 212 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 PPP1R17O96001 155 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 PAX9P55771 341 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 SAMD5Q5TGI4 173 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 OR13A1Q8NGR1 328 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 PRR7Q8TB68 274 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 Q9H3A6 140 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 A0A0G2JLM5 398 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 DPF1Q92782 380 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 NPSP0C0P6 89 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 ANOS1P23352 680 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 YPEL3P61236 119 aaPredicted RBP3.99□□□□□ -1.77
CSMD3-203ENST00000343508 HGFACQ04756 655 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 RTN4RL2Q86UN3 420 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 TTC9CQ8N5M4 171 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 OR2K2Q8NGT1 345 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 LOXL4Q96JB6 756 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 TMSB15BA0A087X1C1 80 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 SYS1-DBNDD2H3BUS1 97 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 PLAUP00749 431 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 LHX2P50458 406 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 PRCDQ00LT1 54 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 CCDC144NLQ6NUI1 221 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 ZNF841Q6ZN19 808 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 NUP35Q8NFH5 326 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 TNRC6AQ8NDV7 1962 aaKnown RBP3.99□□□□□ -1.77
CSMD3-203ENST00000343508 A0A0G2JRQ6 117 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 REG1AP05451 166 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 RFPL3SP0C7P2 107 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 F11RQ9Y624 299 aaKnown RBP3.99□□□□□ -1.77
CSMD3-203ENST00000343508 TRBV20OR9-2A0A075B6H5 130 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 ITGB1BP1O14713 200 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 OR9G9P0C7N8 305 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 MFAP4P55083 255 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 C8orf46Q8TAG6 207 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 SSBP4Q9BWG4 385 aaPredicted RBP3.99□□□□□ -1.77
CSMD3-203ENST00000343508 TMEM160Q9NX00 188 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 CD5LO43866 347 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 EFNA2O43921 213 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 DEFB109BQ30KR1 87 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 C2orf83Q53S99 150 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 CCL13Q99616 98 aa3.99□□□□□ -1.77
CSMD3-203ENST00000343508 A0A1W2PQM1 296 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 MPV17L2Q567V2 206 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 LTBP2Q14767 1821 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 IGHV3-21A0A0B4J1V1 117 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 TMEM262E9PQX1 116 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 COQ2Q96H96 371 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 SGK494Q96LW2 274 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 NXT2Q9NPJ8 142 aaKnown RBP3.98□□□□□ -1.77
CSMD3-203ENST00000343508 IGLV3-1P01715 115 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 ZIC4Q8N9L1 334 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 RABAC1Q9UI14 185 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 PILRBQ9UKJ0 227 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 SAA2-SAA4A0A096LPE2 208 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 KIR2DL5BA0A0G2JN68 375 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 KIR2DL5BA0A0G2JPC4 375 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 NDUFS8O00217 210 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 SAA2P0DJI9 122 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-203ENST00000343508 GLRXP35754 106 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 KIR2DL5AQ8N109 375 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 MYO7BQ6PIF6 2116 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 FAM157AC9JC47 383 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 E9PLN8 166 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 F5H697 171 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 MLNRO43193 412 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 TEX43Q6ZNM6 134 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 SLC25A48Q6ZT89 311 aaKnown RBP3.98□□□□□ -1.77
CSMD3-203ENST00000343508 OR11H12B2RN74 326 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 FOXH1O75593 365 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 COX7A1P24310 79 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 CDKN1AP38936 164 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 GCSAMLQ5JQS6 135 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 OR11H1Q8NG94 326 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 OR5AN1Q8NGI8 311 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 OR11H2Q8NH07 326 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 ST6GALNAC6Q969X2 333 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 SMPXQ9UHP9 88 aa3.98□□□□□ -1.77
CSMD3-203ENST00000343508 PHLDA3Q9Y5J5 127 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms