RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 MUC21Q5SSG8 566 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 TMEM186Q96B77 213 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 C16orf92Q96LL3 132 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 MRPL20Q9BYC9 149 aaKnown RBP6.74□□□□□ -1.33
UBE4B-202ENST00000343090 TRPM7Q96QT4 1865 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 IQCF6A8MYZ5 107 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 ZNF324O75467 553 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-202ENST00000343090 PLAURQ03405 335 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 OCIAD2Q56VL3 154 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 GGNQ86UU5 652 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 MBD3L1Q8WWY6 194 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 CLEC7AQ9BXN2 247 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 COL25A1Q9BXS0 654 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-202ENST00000343090 FBXL15Q9H469 300 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 SPRR3Q9UBC9 169 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 RNF115Q9Y4L5 304 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 F11RQ9Y624 299 aaKnown RBP6.74□□□□□ -1.33
UBE4B-202ENST00000343090 SPCS1Q9Y6A9 102 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 ESPL1Q14674 2120 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 PTPRDP23468 1912 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 RBFOX2O43251 390 aaKnown RBP eCLIP6.74□□□□□ -1.333e-7■■■□□ 17.7
UBE4B-202ENST00000343090 PF4V1P10720 104 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 CCL3L1P16619 93 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 SRSF9Q13242 221 aaKnown RBP eCLIP6.74□□□□□ -1.33
UBE4B-202ENST00000343090 TMEM78Q5T7P6 136 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 DYNLRB2Q8TF09 96 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 TMEM171Q8WVE6 324 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 IFI27L2Q9H2X8 130 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 PNRC2Q9NPJ4 139 aaKnown RBP6.74□□□□□ -1.33
UBE4B-202ENST00000343090 TANC1Q9C0D5 1861 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 IGHV3-49A0A0A0MS15 119 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 IL4P05112 153 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 FAM106CPP0CH98 169 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 ZFP36L1Q07352 338 aaKnown RBP6.74□□□□□ -1.33
UBE4B-202ENST00000343090 BSPH1Q075Z2 132 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 ZNF497Q6ZNH5 498 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 MTURNQ8N3F0 131 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 CST9LQ9H4G1 147 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 AP5S1Q9NUS5 200 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 IGHV3-66A0A0C4DH42 116 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 KBTBD11-OT1A0A1B0GTJ5 212 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 PSMB2P49721 201 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 MFAP4P55083 255 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 LY6EQ16553 131 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 DNM1P46Q6ZS02 220 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 SAA2-SAA4A0A096LPE2 208 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 TRAV1-1A0A0B4J248 108 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 SAA2P0DJI9 122 aaPredicted RBP6.73□□□□□ -1.33
UBE4B-202ENST00000343090 HERVK_113P61574 105 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 WDR82Q6UXN9 313 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 JKAMPQ9P055 326 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 TSC2P49815 1807 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 TSPOP30536 169 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 ID3Q02535 119 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 SIGMAR1Q99720 223 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 PMCHL2Q9BQD1 86 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 FNDC1Q4ZHG4 1894 aaPredicted RBP6.73□□□□□ -1.33
UBE4B-202ENST00000343090 NAPSAO96009 420 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 RNFT1Q5M7Z0 435 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 TMEM136Q6ZRR5 245 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 C17orf82Q86X59 251 aaPredicted RBP6.73□□□□□ -1.33
UBE4B-202ENST00000343090 SLC25A33Q9BSK2 321 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 GP6Q9HCN6 339 aa6.73□□□□□ -1.33
UBE4B-202ENST00000343090 PHF3Q92576 2039 aaKnown RBP6.73□□□□□ -1.33
UBE4B-202ENST00000343090 TRAV9-1A0A075B6T8 112 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 LOC105371242A0A075B767 164 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 H3BVH4 76 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 LILRA1O75019 489 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 GPR183P32249 361 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 CDKN1BP46527 198 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 HGFACQ04756 655 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 Q0VFX4 171 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 MBNL2Q5VZF2 373 aaKnown RBP6.72□□□□□ -1.33
UBE4B-202ENST00000343090 CLEC2AQ6UVW9 174 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 ZNF502Q8TBZ5 544 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 MRPL32Q9BYC8 188 aaKnown RBP6.72□□□□□ -1.33
UBE4B-202ENST00000343090 MRPS18CQ9Y3D5 142 aaKnown RBP6.72□□□□□ -1.33
UBE4B-202ENST00000343090 IGKV3D-15A0A087WSY6 115 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 C7orf71A4D174 169 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 IGKV3-15P01624 115 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 OR9G9P0C7N8 305 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 UCNP55089 124 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 METTL26Q96S19 204 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 RNASE7Q9H1E1 156 aaKnown RBP6.72□□□□□ -1.33
UBE4B-202ENST00000343090 KLK15Q9H2R5 256 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 E9PLN8 166 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 CEACAM8P31997 349 aaPredicted RBP6.72□□□□□ -1.33
UBE4B-202ENST00000343090 C2orf83Q53S99 150 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 LHFPL4Q7Z7J7 247 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 OR10AG1Q8NH19 301 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 RNASE8Q8TDE3 154 aaKnown RBP6.72□□□□□ -1.33
UBE4B-202ENST00000343090 PFN1P07737 140 aaKnown RBP6.72□□□□□ -1.33
UBE4B-202ENST00000343090 NBEAP1P0C6P0 100 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 QRFPP83859 136 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 FOXF2Q12947 444 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 BMPERQ8N8U9 685 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 LRTM2Q8N967 370 aa6.72□□□□□ -1.33
UBE4B-202ENST00000343090 SMIM13P0DJ93 91 aa6.71□□□□□ -1.33
UBE4B-202ENST00000343090 SAA1P0DJI8 122 aaPredicted RBP6.71□□□□□ -1.33
UBE4B-202ENST00000343090 MPV17L2Q567V2 206 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms