RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 MRPS16Q9Y3D3 137 aaKnown RBP12.42□□□□□ -0.42
BRAT1-201ENST00000340611 MED13LQ71F56 2210 aa12.42□□□□□ -0.42
BRAT1-201ENST00000340611 DEGS1O15121 323 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 PAGE4O60829 102 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 ZNF253O75346 499 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 NUDT3O95989 172 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 SELENOVP59797 346 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 TNFAIP6P98066 277 aaPredicted RBP12.41□□□□□ -0.42
BRAT1-201ENST00000340611 PRSS57Q6UWY2 283 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 POLDIP2Q9Y2S7 368 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 MUC21A0A0G2JKD1 596 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 MUC21A0A140T8X8 626 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 PSPNO60542 156 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 IGKV1-39P01597 117 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 IGKV1D-39P04432 117 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 S100GP29377 79 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 RPS16P62249 146 aaKnown RBP12.41□□□□□ -0.42
BRAT1-201ENST00000340611 MUC21Q5SSG8 566 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 Q6P435 159 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 DERL1Q9BUN8 251 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 RAI1Q7Z5J4 1906 aaPredicted RBP12.41□□□□□ -0.42
BRAT1-201ENST00000340611 DEFB108AA8MXU0 73 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.41□□□□□ -0.42
BRAT1-201ENST00000340611 LRRC75BQ2VPJ9 315 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 DUX4L9Q6RFH8 374 aaPredicted RBP12.41□□□□□ -0.42
BRAT1-201ENST00000340611 ZNF114Q8NC26 417 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 STXBP6Q8NFX7 210 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 RCHY1Q96PM5 261 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 GNB4Q9HAV0 340 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 NGBQ9NPG2 151 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 PPP1R3CQ9UQK1 317 aa12.41□□□□□ -0.42
BRAT1-201ENST00000340611 UBR5O95071 2799 aaPredicted RBP12.4□□□□□ -0.42
BRAT1-201ENST00000340611 TRAV8-6A0A0B4J262 113 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 A0A1W2PPR1 153 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 PAX2Q02962 417 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 ZNF90Q03938 601 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 Q56UQ5 140 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 GCSAMQ8N6F7 178 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 AGMATQ9BSE5 352 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 LY6HO94772 140 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 PPOXP50336 477 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 FER1L6-AS1Q8NA97 138 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 OR10V1Q8NGI7 309 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 OR1B1Q8NGR6 318 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 WDR61Q9GZS3 305 aaKnown RBP12.4□□□□□ -0.42
BRAT1-201ENST00000340611 GCM1Q9NP62 436 aa12.4□□□□□ -0.42
BRAT1-201ENST00000340611 KIR2DS1A0A191URI9 304 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 LYNX1G3V0Z9 82 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.433e-6■■■■□ 21.5
BRAT1-201ENST00000340611 CLDN14O95500 239 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 LYNX1P0DP58 116 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 CEACAM3P40198 252 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 KIR2DS4P43632 304 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 KIR2DS1Q14954 304 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 FAM53AQ6NSI3 398 aaPredicted RBP12.39□□□□□ -0.43
BRAT1-201ENST00000340611 ACP7Q6ZNF0 438 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 ZNF843Q8N446 348 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 OR4F17Q8NGA8 305 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 PSMG3Q9BT73 122 aaPredicted RBP12.39□□□□□ -0.43
BRAT1-201ENST00000340611 OR1A1Q9P1Q5 309 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 HAND1O96004 215 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 IGKV1-5P01602 117 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 NAA38Q9BRA0 125 aaKnown RBP12.39□□□□□ -0.43
BRAT1-201ENST00000340611 TMEM204Q9BSN7 226 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 KMT2BQ9UMN6 2715 aaPredicted RBP12.39□□□□□ -0.43
BRAT1-201ENST00000340611 TENM4Q6N022 2769 aa12.39□□□□□ -0.43
BRAT1-201ENST00000340611 SLC17A3O00476 420 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 NPPCP23582 126 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 HBG1P69891 147 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 HBG2P69892 147 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 STUMQ69YW2 141 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 ACSM6Q6P461 480 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 TMEM144Q7Z5S9 345 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 FGFRL1Q8N441 504 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 TAF15Q92804 592 aaKnown RBP eCLIP12.38□□□□□ -0.43
BRAT1-201ENST00000340611 SNURFLB1AK76 121 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 SLC35B1P78383 322 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 SERF2P84101 59 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 LRRC10Q5BKY1 277 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 CD177Q8N6Q3 437 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 OR4S2Q8NH73 311 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 DCTN5Q9BTE1 182 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 OR2W1Q9Y3N9 320 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 TRAV26-1A0A087WT03 109 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 C17orf100A8MU93 164 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 IGLL1P15814 213 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 AESQ08117 197 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 SLC38A11Q08AI6 406 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 HLA-DRB5Q30154 266 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 ZNF841Q6ZN19 808 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 Q6ZS49 121 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 MUC15Q8N387 334 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 ZNRF1Q8ND25 227 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 DYNLRB1Q9NP97 96 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 KCNS2Q9ULS6 477 aa12.38□□□□□ -0.43
BRAT1-201ENST00000340611 POLQO75417 2590 aa12.37□□□□□ -0.43
BRAT1-201ENST00000340611 KRASP01116 189 aa12.37□□□□□ -0.43
BRAT1-201ENST00000340611 GATA2P23769 480 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-201ENST00000340611 APOBEC3AP31941 199 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-201ENST00000340611 CCL17Q92583 94 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms