RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 C2orf83Q53S99 150 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 FAM78BQ5VT40 261 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 PCGF1Q9BSM1 259 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 FBN2P35556 2912 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 ZNF90Q03938 601 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 MORN5Q5VZ52 161 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 C8orf46Q8TAG6 207 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 BBC3Q96PG8 261 aaPredicted RBP12.39□□□□□ -0.43
MBD1-203ENST00000339998 SMIM7Q9BQ49 75 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 SIGLEC9Q9Y336 463 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 C11orf94C9JXX5 98 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 CD69Q07108 199 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 RBMS3Q6XE24 437 aaKnown RBP12.38□□□□□ -0.43
MBD1-203ENST00000339998 SPNS3Q6ZMD2 512 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 NPIPB3Q92617 1050 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 PTPN13Q12923 2485 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 CSPG4Q6UVK1 2322 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 SEC14L6B5MCN3 397 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 LY6LH3BQJ8 138 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 MPDU1O75352 247 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 PRSS8Q16651 343 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 CLEC12BQ2HXU8 276 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 FAM71F2Q6NXP2 309 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 BEND2Q8NDZ0 799 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 VSTM2AQ8TAG5 236 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 MISP3Q96FF7 219 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 PARLQ9H300 379 aa12.38□□□□□ -0.43
MBD1-203ENST00000339998 SAV1Q9H4B6 383 aaPredicted RBP12.38□□□□□ -0.43
MBD1-203ENST00000339998 A6NNC1 897 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 IFNA1P01562 189 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 AGAP20933 346 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 PRR20EP86478 221 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 PRR20CP86479 221 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 PRR20DP86480 221 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 PRR20BP86481 221 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 PRR20AP86496 221 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 RHEBQ15382 184 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 ADIRFQ15847 76 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 SLC16A13Q7RTY0 426 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 NRGNQ92686 78 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 UNKLQ9H9P5 680 aaKnown RBP12.37□□□□□ -0.43
MBD1-203ENST00000339998 SLC45A2Q9UMX9 530 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 IGLC7A0M8Q6 106 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 LY86O95711 162 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 PLGLAQ15195 96 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 VMO1Q7Z5L0 202 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 TMEM144Q7Z5S9 345 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 UHRF2Q96PU4 802 aa12.37□□□□□ -0.43
MBD1-203ENST00000339998 TRAV5A0A0B4J249 113 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 CXCL1P09341 107 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 OR10J4P0C629 311 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 HTR1DP28221 377 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 HES1Q14469 280 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 PPP1R27Q86WC6 154 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 TNFRSF14Q92956 283 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 YTHDF2Q9Y5A9 579 aaKnown RBP12.36□□□□□ -0.43
MBD1-203ENST00000339998 MOSP00540 346 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 STAG3L2P0CL84 134 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 STAG3L3P0CL85 134 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 HNF1AP20823 631 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 LGALS7P47929 136 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 MMDQ15546 238 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 TPTE2P1Q5T6R2 138 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 TMEM37Q8WXS4 190 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 SDF2L1Q9HCN8 221 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 TGIF2-C20orf24A0A0A6YYL0 155 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 CRYGBP07316 175 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 RPL27AP46776 148 aaKnown RBP12.36□□□□□ -0.43
MBD1-203ENST00000339998 NECAP1Q8NC96 275 aa12.36□□□□□ -0.43
MBD1-203ENST00000339998 NBPF19A0A087WUL8 3843 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 NDUFB4O95168 129 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 VENTXO95231 258 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 RPL29P47914 159 aaKnown RBP12.35□□□□□ -0.43
MBD1-203ENST00000339998 RNF212Q495C1 297 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 C15orf54Q8N8G6 183 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 Q8WTZ3 238 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 SLC25A33Q9BSK2 321 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 DMRT1Q9Y5R6 373 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 S4R3C0 116 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 FSTL3O95633 263 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 RND2P52198 227 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 HABP2Q14520 560 aaPredicted RBP12.35□□□□□ -0.43
MBD1-203ENST00000339998 DPM3Q9P2X0 92 aa12.35□□□□□ -0.43
MBD1-203ENST00000339998 RAB31Q13636 194 aa12.34□□□□□ -0.43
MBD1-203ENST00000339998 KLF17Q5JT82 389 aaPredicted RBP12.34□□□□□ -0.43
MBD1-203ENST00000339998 IGHV4-39P01824 125 aa12.34□□□□□ -0.43
MBD1-203ENST00000339998 EFNA4P52798 201 aa12.34□□□□□ -0.43
MBD1-203ENST00000339998 ZNF114Q8NC26 417 aa12.34□□□□□ -0.43
MBD1-203ENST00000339998 IGHV3OR16-10A0A075B7F0 116 aa12.33□□□□□ -0.43
MBD1-203ENST00000339998 A0A1W2PN81 502 aa12.33□□□□□ -0.43
MBD1-203ENST00000339998 SCO2A0A1W2PP80 73 aa12.33□□□□□ -0.43
MBD1-203ENST00000339998 RAB5AP20339 215 aa12.33□□□□□ -0.43
MBD1-203ENST00000339998 PRTN3P24158 256 aa12.33□□□□□ -0.43
MBD1-203ENST00000339998 CHRNA7P36544 502 aa12.33□□□□□ -0.43
MBD1-203ENST00000339998 ZNF503Q96F45 646 aa12.33□□□□□ -0.43
MBD1-203ENST00000339998 IGKV1D-37A0A075B6S9 117 aa12.33□□□□□ -0.44
MBD1-203ENST00000339998 TEX22C9J3V5 150 aa12.33□□□□□ -0.44
MBD1-203ENST00000339998 IGHV2-5P01817 119 aa12.33□□□□□ -0.44
MBD1-203ENST00000339998 GCHFRP30047 84 aa12.33□□□□□ -0.44
MBD1-203ENST00000339998 COMPP49747 757 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms