RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 NXF2Q9GZY0 626 aaKnown RBP13.22□□□□□ -0.29
CMTM1-204ENST00000336328 TRAV14DV4A0A0A6YYC5 116 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 IGHV7-4-1A0A0J9YVY3 117 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 INS-IGF2F8WCM5 200 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 CORTO00230 105 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 IFNA17P01571 189 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 CTSDP07339 412 aaPredicted RBP13.21□□□□□ -0.29
CMTM1-204ENST00000336328 PAFAH1B2P68402 229 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 WFDC3Q8IUB2 231 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 STPG3Q8N7X2 389 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 SLC35G3Q8N808 338 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 PINX1Q96BK5 328 aaKnown RBP13.21□□□□□ -0.29
CMTM1-204ENST00000336328 GALNT14Q96FL9 552 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 OR10C1Q96KK4 312 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 RHPN1-AS1Q9BWJ2 59 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 ENY2Q9NPA8 101 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 RABL2AQ9UBK7 228 aaPredicted RBP13.21□□□□□ -0.29
CMTM1-204ENST00000336328 RABL2BQ9UNT1 228 aa13.21□□□□□ -0.29
CMTM1-204ENST00000336328 SPRY2O43597 315 aa13.2□□□□□ -0.3
CMTM1-204ENST00000336328 ZNF207O43670 478 aaKnown RBP13.2□□□□□ -0.3
CMTM1-204ENST00000336328 SCGB2A1O75556 95 aa13.2□□□□□ -0.3
CMTM1-204ENST00000336328 RAB3DO95716 219 aa13.2□□□□□ -0.3
CMTM1-204ENST00000336328 TRIM16LQ309B1 348 aa13.2□□□□□ -0.3
CMTM1-204ENST00000336328 RNASE12Q5GAN4 147 aaKnown RBP13.2□□□□□ -0.3
CMTM1-204ENST00000336328 GPR141Q7Z602 305 aa13.2□□□□□ -0.3
CMTM1-204ENST00000336328 ABHD1Q96SE0 405 aa13.2□□□□□ -0.3
CMTM1-204ENST00000336328 NAA50Q9GZZ1 169 aaKnown RBP13.2□□□□□ -0.3
CMTM1-204ENST00000336328 UBQLN2Q9UHD9 624 aa13.2□□□□□ -0.3
CMTM1-204ENST00000336328 GABARAPH6UMI1 98 aa13.19□□□□□ -0.3
CMTM1-204ENST00000336328 CHEK1O14757 476 aa13.19□□□□□ -0.3
CMTM1-204ENST00000336328 RGS5O15539 181 aa13.19□□□□□ -0.3
CMTM1-204ENST00000336328 CD74P04233 296 aa13.19□□□□□ -0.3
CMTM1-204ENST00000336328 PI3P19957 117 aa13.19□□□□□ -0.3
CMTM1-204ENST00000336328 MEF2DQ14814 521 aa13.19□□□□□ -0.3
CMTM1-204ENST00000336328 SCGB2B2Q4G0G5 96 aa13.19□□□□□ -0.3
CMTM1-204ENST00000336328 STEAP1BQ6NZ63 245 aa13.19□□□□□ -0.3
CMTM1-204ENST00000336328 RNASE11Q8TAA1 199 aaKnown RBP13.19□□□□□ -0.3
CMTM1-204ENST00000336328 TP53RKQ96S44 253 aa13.19□□□□□ -0.3
CMTM1-204ENST00000336328 MRPS26Q9BYN8 205 aaKnown RBP13.19□□□□□ -0.3
CMTM1-204ENST00000336328 IGHV3OR16-8A0A075B7F1 116 aa13.18□□□□□ -0.3
CMTM1-204ENST00000336328 A0A0B4J293 547 aa13.18□□□□□ -0.3
CMTM1-204ENST00000336328 FAM219AQ8IW50 185 aa13.18□□□□□ -0.3
CMTM1-204ENST00000336328 RNF2Q99496 336 aa13.18□□□□□ -0.3
CMTM1-204ENST00000336328 C14orf166Q9Y224 244 aaKnown RBP13.18□□□□□ -0.3
CMTM1-204ENST00000336328 DISC1C4P0D8 188 aa13.17□□□□□ -0.3
CMTM1-204ENST00000336328 ST8SIA3O43173 380 aa13.17□□□□□ -0.3
CMTM1-204ENST00000336328 IGKV1-5P01602 117 aa13.17□□□□□ -0.3
CMTM1-204ENST00000336328 UCP1P25874 307 aa13.17□□□□□ -0.3
CMTM1-204ENST00000336328 ODF3L2Q3SX64 289 aa13.17□□□□□ -0.3
CMTM1-204ENST00000336328 TMEM217Q8N7C4 229 aa13.17□□□□□ -0.3
CMTM1-204ENST00000336328 TMEM231Q9H6L2 316 aa13.17□□□□□ -0.3
CMTM1-204ENST00000336328 CACFD1Q9UGQ2 172 aa13.17□□□□□ -0.3
CMTM1-204ENST00000336328 TMEM50AO95807 157 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 P0C879 139 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 SMIM18P0DKX4 95 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 ETV6P41212 452 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 PPP5CP53041 499 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 DHODHQ02127 395 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 TNFRSF9Q07011 255 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 SURF2Q15527 256 aaPredicted RBP13.16□□□□□ -0.3
CMTM1-204ENST00000336328 IZUMO4Q1ZYL8 232 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 SP6Q3SY56 376 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 ZNF600Q6ZNG1 722 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 OR13C8Q8NGS7 320 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 MARCH1Q8TCQ1 289 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 RNF183Q96D59 192 aa13.16□□□□□ -0.3
CMTM1-204ENST00000336328 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.16□□□□□ -0.3
CMTM1-204ENST00000336328 TEX13DA0A0J9YY54 714 aaPredicted RBP13.15□□□□□ -0.3
CMTM1-204ENST00000336328 A0A1W2PS18 150 aa13.15□□□□□ -0.3
CMTM1-204ENST00000336328 CDS2O95674 445 aa13.15□□□□□ -0.3
CMTM1-204ENST00000336328 IGHV3-48P01763 117 aa13.15□□□□□ -0.3
CMTM1-204ENST00000336328 ATF4P18848 351 aaPredicted RBP13.15□□□□□ -0.3
CMTM1-204ENST00000336328 RPL5P46777 297 aaKnown RBP13.15□□□□□ -0.3
CMTM1-204ENST00000336328 HOXA1P49639 335 aaPredicted RBP13.15□□□□□ -0.3
CMTM1-204ENST00000336328 SPCS3P61009 180 aa13.15□□□□□ -0.3
CMTM1-204ENST00000336328 SPINK9Q5DT21 86 aa13.15□□□□□ -0.3
CMTM1-204ENST00000336328 PVRIGQ6DKI7 326 aa13.15□□□□□ -0.3
CMTM1-204ENST00000336328 TOMM20LQ6UXN7 152 aa13.15□□□□□ -0.3
CMTM1-204ENST00000336328 OR52E5Q8NH55 327 aa13.15□□□□□ -0.3
CMTM1-204ENST00000336328 TMEM222Q9H0R3 208 aa13.15□□□□□ -0.3
CMTM1-204ENST00000336328 MAP6D1Q9H9H5 199 aa13.15□□□□□ -0.3
CMTM1-204ENST00000336328 CSMD3Q7Z407 3707 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 TRAV30A0A087WSZ9 112 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 DNASE2O00115 360 aaPredicted RBP13.14□□□□□ -0.31
CMTM1-204ENST00000336328 CTDSP2O14595 271 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 CTDSPLO15194 276 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 AKAIN1P0CW23 69 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 RPL35AP18077 110 aaKnown RBP13.14□□□□□ -0.31
CMTM1-204ENST00000336328 ALDH3B2P48448 385 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 DEFB135Q30KP9 77 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 FAM90A2PQ658T7 463 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 TCF24Q7RTU0 167 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 OR4D10Q8NGI6 311 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 DIRAS2Q96HU8 199 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 SCGB3A2Q96PL1 93 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 BCL7BQ9BQE9 202 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 CSTL1Q9H114 145 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 MIXL1Q9H2W2 232 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 KCNIP3Q9Y2W7 256 aa13.14□□□□□ -0.31
CMTM1-204ENST00000336328 IGHV3-49A0A0A0MS15 119 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms