RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 C8orf46Q8TAG6 207 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 PLPPR2Q96GM1 343 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 NPFFR1Q9GZQ6 430 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 KLK15Q9H2R5 256 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 SEPSECSQ9HD40 501 aaKnown RBP4.65□□□□□ -1.66
PTPRB-202ENST00000334414 TAF1P21675 1872 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 ATP5G1P05496 136 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 CD28P10747 220 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 ATP5G3P48201 142 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 UCNP55089 124 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 CT55Q8WUE5 264 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 CTHRC1Q96CG8 243 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 CFHR5Q9BXR6 569 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 SPANXB1Q9NS25 103 aaPredicted RBP4.65□□□□□ -1.66
PTPRB-202ENST00000334414 LAMTOR3Q9UHA4 124 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 C10orf91Q5T1B1 145 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 PPP1R27Q86WC6 154 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 DUSP15Q9H1R2 295 aaPredicted RBP4.65□□□□□ -1.66
PTPRB-202ENST00000334414 IGKV1D-16P01601 117 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 C1QTNF4Q9BXJ3 329 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 FOXA2Q9Y261 457 aaPredicted RBP4.65□□□□□ -1.67
PTPRB-202ENST00000334414 MYMXA0A1B0GTQ4 84 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 F8WEM9 126 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 PIN1P1O15428 100 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 IL18BPO95998 194 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 DUTP33316 252 aaKnown RBP4.65□□□□□ -1.67
PTPRB-202ENST00000334414 UNQ5815/PRO19632Q6UWF5 114 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 VEGFBP49765 207 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 RBMY1FQ15415 496 aaKnown RBP4.65□□□□□ -1.67
PTPRB-202ENST00000334414 LINC01590Q5TEZ4 76 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 RPUSD1Q9UJJ7 312 aaKnown RBP4.65□□□□□ -1.67
PTPRB-202ENST00000334414 A6NNC1 897 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 J3QRE1 110 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 TPRX1Q8N7U7 411 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.65□□□□□ -1.67
PTPRB-202ENST00000334414 IQCF6A8MYZ5 107 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 AHRRA9YTQ3 701 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 CMC4P56277 68 aaPredicted RBP4.65□□□□□ -1.67
PTPRB-202ENST00000334414 TGIF1Q15583 401 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 SFTA2Q6UW10 78 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 RASL10AQ92737 203 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 SPATA25Q9BR10 227 aa4.65□□□□□ -1.67
PTPRB-202ENST00000334414 YPEL1O60688 119 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 LINC01551Q86U37 167 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 YPEL2Q96QA6 119 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 FZR1Q9UM11 496 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 MRPS18CQ9Y3D5 142 aaKnown RBP4.64□□□□□ -1.67
PTPRB-202ENST00000334414 SOCS3O14543 225 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 Q6ZS49 121 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 A0A1W2PQF6 199 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 B9A039 149 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 ZNHIT1O43257 154 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 HTN1P15515 57 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 FAM89BQ8N5H3 189 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 RPL32P62910 135 aaKnown RBP4.64□□□□□ -1.67
PTPRB-202ENST00000334414 ABHD12Q8N2K0 398 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 TMEM75Q8N9X5 138 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 C1QTNF5Q9BXJ0 243 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 PILRAQ9UKJ1 303 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 NUMA1Q14980 2115 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 GOLGA4Q13439 2230 aaKnown RBP4.64□□□□□ -1.67
PTPRB-202ENST00000334414 HIST1H4AP62805 103 aaKnown RBP4.64□□□□□ -1.67
PTPRB-202ENST00000334414 LINC00114Q6XXX2 140 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 VKORC1Q9BQB6 163 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 GTSF1LQ9H1H1 148 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 ZIC3O60481 467 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 IGFBP2P18065 325 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 PRCDQ00LT1 54 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 MPV17L2Q567V2 206 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 PRSS41Q7RTY9 318 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 PILRBQ9UKJ0 227 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 C1orf210Q8IVY1 113 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 RNF125Q96EQ8 232 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 IGKV1D-42A0A075B6H8 117 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 RNASE7Q9H1E1 156 aaKnown RBP4.64□□□□□ -1.67
PTPRB-202ENST00000334414 TEX43Q6ZNM6 134 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 C21orf62Q9NYP8 219 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 ANK1P16157 1881 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 J3KRW8 73 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 PSG1P11464 419 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.64□□□□□ -1.67
PTPRB-202ENST00000334414 SPINK14Q6IE38 97 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 GAGE2AQ6NT46 116 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 ZNF497Q6ZNH5 498 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 OTOFQ9HC10 1997 aa4.64□□□□□ -1.67
PTPRB-202ENST00000334414 GAGE12HA6NDE8 117 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 EFNB3Q15768 340 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 Q6ZT83 130 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 ST6GALNAC6Q969X2 333 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 RNF5Q99942 180 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 SCN3AQ9NY46 2000 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 IGHV3OR15-7A0A075B7D8 119 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 A0A1W2PR80 420 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 TBX6O95947 436 aaPredicted RBP4.63□□□□□ -1.67
PTPRB-202ENST00000334414 C1orf53Q5VUE5 145 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 OR13A1Q8NGR1 328 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 ATP6V0E2Q8NHE4 81 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 ZNF576Q9H609 170 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 CXCL1P09341 107 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 HLA-DMBP28068 263 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms