RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 TGOLN2O43493 480 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 ENSAO43768 121 aaKnown RBP12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 IGHV3-48P01763 117 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 ZNF137PP52743 207 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 VSTM2AQ8TAG5 236 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 TXNDC17Q9BRA2 123 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 GPR61Q9BZJ8 451 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 FUT9Q9Y231 359 aa12.01□□□□□ -0.49
CLCNKA-201ENST00000331433 PPP1R2P9O14990 202 aa12□□□□□ -0.49
CLCNKA-201ENST00000331433 ATP5IP56385 69 aaPredicted RBP12□□□□□ -0.49
CLCNKA-201ENST00000331433 FAM3BP58499 235 aaPredicted RBP12□□□□□ -0.49
CLCNKA-201ENST00000331433 SSBP2P81877 361 aaPredicted RBP12□□□□□ -0.49
CLCNKA-201ENST00000331433 PSG5Q15238 335 aa12□□□□□ -0.49
CLCNKA-201ENST00000331433 RALYQ9UKM9 306 aaKnown RBP12□□□□□ -0.49
CLCNKA-201ENST00000331433 PPP5D1E7EU14 171 aa12□□□□□ -0.49
CLCNKA-201ENST00000331433 HRNRQ86YZ3 2850 aaPredicted RBP12□□□□□ -0.49
CLCNKA-201ENST00000331433 REG1AP05451 166 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 PPOXP50336 477 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 OR2T10Q8NGZ9 312 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 OR4A5Q8NH83 315 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 SLC35E1Q96K37 410 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 FNDC4Q9H6D8 234 aaPredicted RBP11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 SPTBN1Q01082 2364 aaKnown RBP11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 TRBV23-1A0A0A0MS06 115 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 IGHV2-26A0A0B4J1V2 119 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 A0A1W2PN81 502 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 MT-CO2P00403 227 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 ZNF841Q6ZN19 808 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 HIST3H2BBQ8N257 126 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 ZNF503Q96F45 646 aa11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 GAR1Q9NY12 217 aaKnown RBP11.99□□□□□ -0.49
CLCNKA-201ENST00000331433 OR7C2O60412 319 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 GGCTO75223 188 aaKnown RBP11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 LY6HO94772 140 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 MRGPRG-AS1Q2M3A8 158 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 HLA-DRB5Q30154 266 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 VMA21Q3ZAQ7 101 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 FBXL19-AS1Q494R0 122 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 OCC1Q8TAD7 63 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 TMEM37Q8WXS4 190 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 SFRP2Q96HF1 295 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 ABCA1O95477 2261 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 A0A1W2PPI3 338 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 OR10J4P0C629 311 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 CNTFRP26992 372 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 S100A2P29034 98 aa11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 SRP14P37108 136 aaKnown RBP11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 ZNF672Q499Z4 452 aaPredicted RBP11.98□□□□□ -0.49
CLCNKA-201ENST00000331433 ARHGAP32A7KAX9 2087 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 INS-IGF2F8WCM5 200 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 IL3RAP26951 378 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 MC5RP33032 325 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 UCNP55089 124 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 ADORA2A-AS1P86434 159 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 KLRB1Q12918 225 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 CACNG8Q8WXS5 425 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 TECRQ9NZ01 308 aaKnown RBP11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 IGHV2-70P01814 119 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 OR5G3P0C626 314 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 APELAP0DMC3 54 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 CD99P14209 185 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 COX7A1P24310 79 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 GPX4P36969 197 aaPredicted RBP11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 PYY3Q5JQD4 70 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 MORN5Q5VZ52 161 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 KCNIP4Q6PIL6 250 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 ST6GALNAC3Q8NDV1 305 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 OR10D4PQ8NGN7 298 aa11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 MRPL36Q9P0J6 103 aaKnown RBP11.97□□□□□ -0.49
CLCNKA-201ENST00000331433 ELOA3CA0A087WX78 387 aaPredicted RBP11.96□□□□□ -0.49
CLCNKA-201ENST00000331433 A0A0U1RQK1 487 aa11.96□□□□□ -0.49
CLCNKA-201ENST00000331433 MDFIC2A0A1B0GVS7 189 aa11.96□□□□□ -0.49
CLCNKA-201ENST00000331433 IGLV1-47P01700 117 aa11.96□□□□□ -0.49
CLCNKA-201ENST00000331433 C19orf35Q6ZS72 473 aa11.96□□□□□ -0.49
CLCNKA-201ENST00000331433 NPIPB3Q92617 1050 aa11.96□□□□□ -0.49
CLCNKA-201ENST00000331433 C11orf52Q96A22 123 aa11.96□□□□□ -0.49
CLCNKA-201ENST00000331433 UHRF2Q96PU4 802 aa11.96□□□□□ -0.49
CLCNKA-201ENST00000331433 GSN-AS1Q9NRJ2 163 aa11.96□□□□□ -0.49
CLCNKA-201ENST00000331433 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.5
CLCNKA-201ENST00000331433 K7EN84 100 aa11.96□□□□□ -0.5
CLCNKA-201ENST00000331433 S100A12P80511 92 aa11.96□□□□□ -0.5
CLCNKA-201ENST00000331433 ZNF90Q03938 601 aa11.96□□□□□ -0.5
CLCNKA-201ENST00000331433 HCP5Q6MZN7 132 aa11.96□□□□□ -0.5
CLCNKA-201ENST00000331433 MIOXQ9UGB7 285 aa11.96□□□□□ -0.5
CLCNKA-201ENST00000331433 PPIAL4CA0A0B4J2A2 164 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 FABP1P07148 127 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 PPIAL4GP0DN37 164 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 FABP4P15090 132 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 LGALS7P47929 136 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 PRSS8Q16651 343 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 RUSC1-AS1Q66K80 236 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 TEX38Q6PEX7 206 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 SGMS2Q8NHU3 365 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 RNASEH2CQ8TDP1 164 aaKnown RBP11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 SLC25A33Q9BSK2 321 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 TMEM167BQ9NRX6 74 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 PSMB11A5LHX3 300 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 AREGP15514 252 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 CRYBB3P26998 211 aa11.95□□□□□ -0.5
CLCNKA-201ENST00000331433 SUB1P53999 127 aaKnown RBP eCLIP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms