RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 COLCA1Q6ZS62 124 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 ST20Q9HBF5 79 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 TMEM140Q9NV12 185 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 METRNQ9UJH8 293 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 MPC1Q9Y5U8 109 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 A0A1W2PRE2 83 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 FAM71F2Q6NXP2 309 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 GTF2H5Q6ZYL4 71 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 MAP1LC3CQ9BXW4 147 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 TMEM167BQ9NRX6 74 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 MRPL27Q9P0M9 148 aaKnown RBP16.96■□□□□ 0.31
CMTM4-201ENST00000330687 WDFY4Q6ZS81 3184 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 CCL7P80098 99 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 LINC00596Q86U02 117 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 OR4S2Q8NH73 311 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 HES4Q9HCC6 221 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 POLDIP2Q9Y2S7 368 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 HIST1H1EP10412 219 aaKnown RBP16.96■□□□□ 0.31
CMTM4-201ENST00000330687 PAX2Q02962 417 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 C5orf17Q8NAS9 161 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 NCOR1P1Q9H4R4 102 aa16.96■□□□□ 0.31
CMTM4-201ENST00000330687 CEP250Q9BV73 2442 aa16.96■□□□□ 0.3
CMTM4-201ENST00000330687 C17orf82Q86X59 251 aaPredicted RBP16.95■□□□□ 0.3
CMTM4-201ENST00000330687 OR2V2Q96R30 315 aa16.95■□□□□ 0.3
CMTM4-201ENST00000330687 F11RQ9Y624 299 aaKnown RBP16.95■□□□□ 0.3
CMTM4-201ENST00000330687 AREGP15514 252 aa16.95■□□□□ 0.3
CMTM4-201ENST00000330687 ARR3P36575 388 aa16.95■□□□□ 0.3
CMTM4-201ENST00000330687 S1PR3Q99500 378 aa16.95■□□□□ 0.3
CMTM4-201ENST00000330687 CDX2Q99626 313 aaPredicted RBP16.95■□□□□ 0.3
CMTM4-201ENST00000330687 INTS1Q8N201 2190 aaKnown RBP16.95■□□□□ 0.3
CMTM4-201ENST00000330687 IGHV1-24A0A0C4DH33 117 aa16.95■□□□□ 0.3
CMTM4-201ENST00000330687 CELA3AP09093 270 aa16.95■□□□□ 0.3
CMTM4-201ENST00000330687 OR8A1Q8NGG7 326 aa16.95■□□□□ 0.3
CMTM4-201ENST00000330687 AMMECR1Q9Y4X0 333 aaPredicted RBP16.95■□□□□ 0.3
CMTM4-201ENST00000330687 SMIM27A0A1W2PRY6 76 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 CHEK1O14757 476 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 SPINT2O43291 252 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 CD5LO43866 347 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 NXPH1P58417 271 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 OR1C1Q15619 314 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 LYSMD4Q5XG99 296 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 OR9G1Q8NH87 305 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 C11orf52Q96A22 123 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 NPIPB11E5RHQ5 1161 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 P0C879 139 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 IGLC1P0CG04 106 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 FXYD7P58549 80 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 SPINK14Q6IE38 97 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 FAM214BQ7L5A3 538 aa16.94■□□□□ 0.3
CMTM4-201ENST00000330687 OOEPA6NGQ2 149 aa16.93■□□□□ 0.3
CMTM4-201ENST00000330687 WFDC12Q8WWY7 111 aa16.93■□□□□ 0.3
CMTM4-201ENST00000330687 PERPQ96FX8 193 aa16.93■□□□□ 0.3
CMTM4-201ENST00000330687 CRISPLD2Q9H0B8 497 aa16.93■□□□□ 0.3
CMTM4-201ENST00000330687 ZBTB34Q8NCN2 500 aa16.93■□□□□ 0.3
CMTM4-201ENST00000330687 THYN1Q9P016 225 aa16.93■□□□□ 0.3
CMTM4-201ENST00000330687 J3QW42 95 aa16.93■□□□□ 0.3
CMTM4-201ENST00000330687 KLK10O43240 276 aa16.93■□□□□ 0.3
CMTM4-201ENST00000330687 KRTAP27-1Q3LI81 207 aa16.93■□□□□ 0.3
CMTM4-201ENST00000330687 Q6ZR03 302 aa16.93■□□□□ 0.3
CMTM4-201ENST00000330687 CHODLQ9H9P2 273 aa16.93■□□□□ 0.3
CMTM4-201ENST00000330687 REG1AP05451 166 aa16.92■□□□□ 0.3
CMTM4-201ENST00000330687 MORN5Q5VZ52 161 aa16.92■□□□□ 0.3
CMTM4-201ENST00000330687 OR4A5Q8NH83 315 aa16.92■□□□□ 0.3
CMTM4-201ENST00000330687 COMMD5Q9GZQ3 224 aa16.92■□□□□ 0.3
CMTM4-201ENST00000330687 PLCE1Q9P212 2302 aa16.92■□□□□ 0.3
CMTM4-201ENST00000330687 MBNL3Q9NUK0 354 aaKnown RBP16.92■□□□□ 0.3
CMTM4-201ENST00000330687 CHTOPQ9Y3Y2 248 aaKnown RBP16.92■□□□□ 0.3
CMTM4-201ENST00000330687 A0A1W2PQM1 296 aa16.92■□□□□ 0.3
CMTM4-201ENST00000330687 IGLV2-8P01709 118 aa16.92■□□□□ 0.3
CMTM4-201ENST00000330687 MEF2CQ06413 473 aaPredicted RBP16.92■□□□□ 0.3
CMTM4-201ENST00000330687 PLXNB1O43157 2135 aa16.91■□□□□ 0.3
CMTM4-201ENST00000330687 DKK1O94907 266 aa16.91■□□□□ 0.3
CMTM4-201ENST00000330687 B3GALT5-AS1P59052 145 aa16.91■□□□□ 0.3
CMTM4-201ENST00000330687 HIST1H1AQ02539 215 aaPredicted RBP16.91■□□□□ 0.3
CMTM4-201ENST00000330687 NHLH1Q02575 133 aa16.91■□□□□ 0.3
CMTM4-201ENST00000330687 TMEM97Q5BJF2 176 aa16.91■□□□□ 0.3
CMTM4-201ENST00000330687 PRSS57Q6UWY2 283 aa16.91■□□□□ 0.3
CMTM4-201ENST00000330687 SPEM1Q8N4L4 309 aa16.91■□□□□ 0.3
CMTM4-201ENST00000330687 TAS2R45P59539 299 aa16.91■□□□□ 0.3
CMTM4-201ENST00000330687 RAB30Q15771 203 aa16.91■□□□□ 0.3
CMTM4-201ENST00000330687 Q8TCH9 128 aa16.91■□□□□ 0.3
CMTM4-201ENST00000330687 C1orf159Q96HA4 380 aa16.91■□□□□ 0.3
CMTM4-201ENST00000330687 C16orf54Q6UWD8 224 aa16.9■□□□□ 0.3
CMTM4-201ENST00000330687 OR2K2Q8NGT1 345 aa16.9■□□□□ 0.3
CMTM4-201ENST00000330687 ABI3Q9P2A4 366 aa16.9■□□□□ 0.3
CMTM4-201ENST00000330687 HLA-DRB1P01911 266 aa16.9■□□□□ 0.3
CMTM4-201ENST00000330687 MDP1Q86V88 176 aa16.9■□□□□ 0.3
CMTM4-201ENST00000330687 OR10AG1Q8NH19 301 aa16.9■□□□□ 0.3
CMTM4-201ENST00000330687 COQ2Q96H96 371 aa16.9■□□□□ 0.3
CMTM4-201ENST00000330687 KLF13Q9Y2Y9 288 aaPredicted RBP16.9■□□□□ 0.3
CMTM4-201ENST00000330687 PINLYPA6NC86 204 aa16.9■□□□□ 0.3
CMTM4-201ENST00000330687 SPCS1Q9Y6A9 102 aa16.9■□□□□ 0.3
CMTM4-201ENST00000330687 LY96Q9Y6Y9 160 aa16.9■□□□□ 0.3
CMTM4-201ENST00000330687 IGHV1-45A0A0A0MS14 117 aa16.89■□□□□ 0.29
CMTM4-201ENST00000330687 IGHV5-10-1A0A0J9YXX1 117 aa16.89■□□□□ 0.29
CMTM4-201ENST00000330687 LOC389332A0A1B0GUA5 103 aa16.89■□□□□ 0.29
CMTM4-201ENST00000330687 SMPD2O60906 423 aa16.89■□□□□ 0.29
CMTM4-201ENST00000330687 DUTP33316 252 aaKnown RBP16.89■□□□□ 0.29
CMTM4-201ENST00000330687 JMJD8Q96S16 334 aa16.89■□□□□ 0.29
CMTM4-201ENST00000330687 PKIBQ9C010 78 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms