RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TMEM147Q9BVK8 224 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 C1QTNF5Q9BXJ0 243 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 C12orf49Q9H741 205 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 ZNF331Q9NQX6 463 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-201ENST00000328923 MTCH1Q9NZJ7 389 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 LRRC30A6NM36 301 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 TUSC2O75896 110 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 MT-CO3P00414 261 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 CATR1Q13166 79 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 TMEM42Q69YG0 159 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 LINC00696Q6ZRV3 163 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 SYT8Q8NBV8 401 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-201ENST00000328923 BORCS8Q96FH0 119 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 ZNF391Q9UJN7 358 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 MPC1Q9Y5U8 109 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A10PA6NDY2 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A18PA6NE21 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A16PA6NEW6 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A20PA6NIJ5 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A8PA6NJQ4 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A7PA6NKC0 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A27PA6NNH2 459 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A22PA8MWA6 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A12PA8MX19 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A5PA8MXJ8 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A23PA8MXZ1 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 F8W1H4 67 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 K7ESF4 209 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 IGKV1-39P01597 117 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 IGKV1D-39P04432 117 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A15PP0C7V4 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A13PP0C7W8 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A14PP0C7W9 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FAM90A24PP0C7X0 464 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 COL8A2P25067 703 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FKBP2P26885 142 aaKnown RBP9.79□□□□□ -0.84
SHMT2-201ENST00000328923 RBM11P57052 281 aaKnown RBP9.79□□□□□ -0.84
SHMT2-201ENST00000328923 FBXW4P57775 412 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 TMEM14EPQ6UXP3 125 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 H1FXQ92522 213 aaKnown RBP9.79□□□□□ -0.84
SHMT2-201ENST00000328923 RAX2Q96IS3 184 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 KCNS2Q9ULS6 477 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 DIDO1Q9BTC0 2240 aaKnown RBP9.79□□□□□ -0.84
SHMT2-201ENST00000328923 NPIPB5A8MRT5 1133 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 OR7C1O76099 320 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-201ENST00000328923 F2RP25116 425 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 GPR12P47775 334 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 CXCL12P48061 93 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 GUSBP1Q15486 140 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 ABHD17BQ5VST6 288 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 LYSMD4Q5XG99 296 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 NABP1Q96AH0 204 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 PPDPFQ9H3Y8 114 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 DEPPQ9NTK1 212 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 VPREB3Q9UKI3 123 aa9.79□□□□□ -0.84
SHMT2-201ENST00000328923 SEC16AO15027 2179 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 IGKV1-12A0A0C4DH73 117 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 A0A1W2PPV4 95 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 A0A1W2PRD5 423 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 A0A1W2PRF3 423 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 A0A1W2PRM7 423 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 C9JCJ5 164 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 SYNGR1O43759 233 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 IGKV1-5P01602 117 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 IGKV1D-12P01611 117 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 FHL3Q13643 280 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 PDLIM3Q53GG5 364 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-201ENST00000328923 CENPWQ5EE01 88 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 Q6ZUT4 128 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 TMEM54Q969K7 222 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 SMIM27A0A1W2PRY6 76 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 K7ERJ3 54 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 SCTP09683 121 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 NHLRC4P0CG21 123 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-201ENST00000328923 EDDM3BP56851 147 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 ZNF718Q3SXZ3 478 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 TIGITQ495A1 244 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 TEX45Q8NA69 505 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 MAP1LC3CQ9BXW4 147 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 ZNF442Q9H7R0 627 aa9.78□□□□□ -0.84
SHMT2-201ENST00000328923 TIMM8BQ9Y5J9 83 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-201ENST00000328923 A0A1W2PRE2 83 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 IZUMO1RA6ND01 250 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 GFRA3O60609 400 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 CRYGSP22914 178 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 PRTN3P24158 256 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 KIR2DL2P43627 348 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-201ENST00000328923 PQLC2Q6ZP29 291 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 OR4A16Q8NH70 328 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 SIT1Q9Y3P8 196 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 TRGV10A0A0A0MS01 117 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 H3BMG7 143 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 OR9G9P0C7N8 305 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 SMIM13P0DJ93 91 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 NTF4P34130 210 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 SLC25A45Q8N413 288 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 SSBP3Q9BWW4 388 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-201ENST00000328923 LY96Q9Y6Y9 160 aa9.77□□□□□ -0.85
SHMT2-201ENST00000328923 ASXL3Q9C0F0 2248 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms