RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 FOXA3P55318 350 aaPredicted RBP5.97□□□□□ -1.45
SMC1A-201ENST00000322213 MPV17L2Q567V2 206 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 TTC9CQ8N5M4 171 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 RLN3Q8WXF3 142 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 SLC25A2Q9BXI2 301 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 CCL1P22362 96 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 PDLIM4P50479 330 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 EGR4Q05215 589 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 Q0VG73 95 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 COA6Q5JTJ3 125 aaKnown RBP5.97□□□□□ -1.45
SMC1A-201ENST00000322213 RTN4RL2Q86UN3 420 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 PRELID3AQ96N28 172 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 PPIAL4EA0A075B759 164 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 TMPRSS2O15393 492 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 DPM2O94777 84 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 IGHV3-13P01766 116 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 IGHV3-7P01780 117 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 CXCL10P02778 98 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 PPIAL4FP0DN26 164 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 RASL10BQ96S79 203 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 NABP2Q9BQ15 211 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 PPIAL4AQ9Y536 164 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 PHLDA3Q9Y5J5 127 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 AHRRA9YTQ3 701 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 CX3CL1P78423 397 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 MBNL2Q5VZF2 373 aaKnown RBP5.97□□□□□ -1.45
SMC1A-201ENST00000322213 LINC00305Q7Z4B0 112 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 HBDP02042 147 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 TNXAQ16473 311 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 TMEM52Q8NDY8 209 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF479Q96JC4 524 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 PLA2G3Q9NZ20 509 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 ZFYVE26Q68DK2 2539 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 TRAV5A0A0B4J249 113 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 GAGE12HA6NDE8 117 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 RRHO14718 337 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 MGPP08493 103 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 PLNP26678 52 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 LYPD6BQ8NI32 183 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 SLC25A40Q8TBP6 338 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 SRSF12Q8WXF0 261 aaKnown RBP5.97□□□□□ -1.45
SMC1A-201ENST00000322213 WBP1Q96G27 269 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 FAM60AQ9NP50 221 aa5.97□□□□□ -1.45
SMC1A-201ENST00000322213 A0A0A6YYD4 124 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 TRAV8-4A0A0B4J246 113 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 C9orf118A6NHY6 69 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 HOXA3O43365 443 aaPredicted RBP5.96□□□□□ -1.45
SMC1A-201ENST00000322213 LEPP41159 167 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 PRSS12P56730 875 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 C10orf128Q5T292 105 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 ZADH2Q8N4Q0 377 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 OR13C6PQ8NH95 151 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 TSKUQ8WUA8 353 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 MGST2Q99735 147 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 FZR1Q9UM11 496 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 PSMB11A5LHX3 300 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 VKORC1L1Q8N0U8 176 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 PIMREGQ9BSJ6 248 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 GOLGB1Q14789 3259 aaKnown RBP5.96□□□□□ -1.45
SMC1A-201ENST00000322213 A0A1W2PRE2 83 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 A8MWV9 139 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 ADAMTSL5Q6ZMM2 481 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 CIARTQ8N365 385 aaPredicted RBP5.96□□□□□ -1.45
SMC1A-201ENST00000322213 GATAD1Q8WUU5 269 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 RNF186Q9NXI6 227 aa5.96□□□□□ -1.45
SMC1A-201ENST00000322213 KLHDC3Q9BQ90 382 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 C3orf80F5H4A9 247 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 UCP2P55851 309 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 ADIPOQQ15848 244 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 DRAM1Q8N682 238 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 OR4C13Q8NGP0 309 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 UCN2Q96RP3 112 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 MMP17Q9ULZ9 603 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 A0A1W2PQM1 296 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 MOGAT3Q86VF5 341 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 FADS6Q8N9I5 356 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 DUSP15Q9H1R2 295 aaPredicted RBP5.96□□□□□ -1.46
SMC1A-201ENST00000322213 F8P00451 2351 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 OR9G9P0C7N8 305 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 IZUMO4Q1ZYL8 232 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 C1QL2Q7Z5L3 287 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 C18orf15Q96N68 181 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 SLC25A10Q9UBX3 287 aaPredicted RBP5.96□□□□□ -1.46
SMC1A-201ENST00000322213 PILRAQ9UKJ1 303 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 DNAH12Q6ZR08 3092 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 APOBEC3AP31941 199 aaPredicted RBP5.96□□□□□ -1.46
SMC1A-201ENST00000322213 RAB1CQ92928 201 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 SPANXDQ9BXN6 97 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 TNFRSF19Q9NS68 423 aa5.96□□□□□ -1.46
SMC1A-201ENST00000322213 C9orf172C9J069 976 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 PATE4P0C8F1 98 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 TMEM30BQ3MIR4 351 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 C16orf54Q6UWD8 224 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 SRCAPQ6ZRS2 3230 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 A0A087WV48 116 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 TMSB15BA0A087X1C1 80 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 A0A1W2PS18 150 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 H3BRM9 83 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 NDUFB3O43676 98 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 TM4SF4P48230 202 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms