RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PRNTQ86SH4 94 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 TCTEX1D1Q8N7M0 179 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 SSC4DQ8WTU2 575 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 AAMDCQ9H7C9 122 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 DNAJC4Q9NNZ3 241 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 MUC3AQ02505 3323 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 EML5Q05BV3 1969 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 LOC102723971A0A1B0GUV8 181 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 K7ENP7 123 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 COL8A1P27658 744 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 MFAP2P55001 183 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 DIAPH2-AS1Q14236 149 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 ICAM4Q14773 271 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 C19orf35Q6ZS72 473 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 S100A7AQ86SG5 101 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 THYN1Q9P016 225 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 NDUFA2O43678 99 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 MEOX2P50222 304 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 TCTAP57738 103 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 UNQ5815/PRO19632Q6UWF5 114 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 P2RX4Q99571 388 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 DERL1Q9BUN8 251 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 HSPB7Q9UBY9 170 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 TRAV5A0A0B4J249 113 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 TMEM178BH3BS89 294 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 ZNF253O75346 499 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 OR2J3O76001 311 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 PYYP10082 97 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 TFPI2P48307 235 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 SIGLECL1Q8N7X8 197 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 GAFA1Q96PS6 74 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 MBNL3Q9NUK0 354 aaKnown RBP9.05□□□□□ -0.96
TOP3A-201ENST00000321105 ZNF98A6NK75 572 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 GCHFRP30047 84 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 ERVK11-1P61568 191 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 RNASEKQ6P5S7 137 aaKnown RBP9.05□□□□□ -0.96
TOP3A-201ENST00000321105 TOMM20LQ6UXN7 152 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 TMEM18Q96B42 140 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 FOXI3A8MTJ6 420 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-201ENST00000321105 TIMM23O14925 209 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 ELOVL1Q9BW60 279 aa9.05□□□□□ -0.96
TOP3A-201ENST00000321105 SEPSECSQ9HD40 501 aaKnown RBP9.05□□□□□ -0.96
TOP3A-201ENST00000321105 PDE6DO43924 150 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 IL4P05112 153 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 AMTP48728 403 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 MST1LQ2TV78 715 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 LINC00305Q7Z4B0 112 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 ZNF430Q9H8G1 570 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-201ENST00000321105 MIOXQ9UGB7 285 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 CRISP2P16562 243 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 PAX9P55771 341 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 CLEC2AQ6UVW9 174 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 C11orf53Q8IXP5 236 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 Q8WTZ3 238 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 MARVELD3Q96A59 401 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 IMMP2LQ96T52 175 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 DPM3Q9P2X0 92 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 FOXA2Q9Y261 457 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-201ENST00000321105 MPDU1O75352 247 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 S100A8P05109 93 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 C8orf88P0DMB2 117 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 ZNF506Q5JVG8 444 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 TREML4Q6UXN2 200 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 Q6ZPA2 131 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 SLC25A33Q9BSK2 321 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 PSMG3Q9BT73 122 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-201ENST00000321105 IFI27L2Q9H2X8 130 aa9.04□□□□□ -0.96
TOP3A-201ENST00000321105 CARHSP1Q9Y2V2 147 aaKnown RBP9.04□□□□□ -0.96
TOP3A-201ENST00000321105 C15orf61A6NNL5 157 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 PF4V1P10720 104 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 NHLH1Q02575 133 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 OSR1Q8TAX0 266 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-201ENST00000321105 TMEM133Q9H2Q1 129 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 TNRC6AQ8NDV7 1962 aaKnown RBP9.03□□□□□ -0.96
TOP3A-201ENST00000321105 AGAP20933 346 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 CBLN1P23435 193 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 RPEL1Q2QD12 228 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 CRIP3Q6Q6R5 217 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 ZNF788Q6ZQV5 615 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 OR1L6Q8NGR2 347 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 TXN2Q99757 166 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 ANAPC10Q9UM13 185 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 UPK2O00526 184 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 TRGC1P0CF51 173 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 EIF4E3Q8N5X7 224 aaKnown RBP9.03□□□□□ -0.96
TOP3A-201ENST00000321105 PACRGQ96M98 296 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-201ENST00000321105 C1RLQ9NZP8 487 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 HIGD1AQ9Y241 93 aa9.03□□□□□ -0.96
TOP3A-201ENST00000321105 DOPEY1Q5JWR5 2465 aa9.02□□□□□ -0.96
TOP3A-201ENST00000321105 CA1P00915 261 aaPredicted RBP9.02□□□□□ -0.96
TOP3A-201ENST00000321105 HIST1H1BP16401 226 aaKnown RBP9.02□□□□□ -0.96
TOP3A-201ENST00000321105 MAPK1IP1LQ8NDC0 245 aa9.02□□□□□ -0.96
TOP3A-201ENST00000321105 MSRB2Q9Y3D2 182 aa9.02□□□□□ -0.96
TOP3A-201ENST00000321105 FOXH1O75593 365 aa9.02□□□□□ -0.97
TOP3A-201ENST00000321105 ORM1P02763 201 aa9.02□□□□□ -0.97
TOP3A-201ENST00000321105 AMY1AP04745 511 aa9.02□□□□□ -0.97
TOP3A-201ENST00000321105 ASPHD1Q5U4P2 390 aa9.02□□□□□ -0.97
TOP3A-201ENST00000321105 HEPN1Q6WQI6 88 aa9.02□□□□□ -0.97
TOP3A-201ENST00000321105 CFAP47Q6ZTR5 3102 aa9.02□□□□□ -0.97
TOP3A-201ENST00000321105 TEX50A0A1B0GTY4 177 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms