RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 PPP1R35Q8TAP8 253 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 Q8TCH9 128 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 RND1Q92730 232 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 HSD17B10Q99714 261 aaKnown RBP12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 A0A0G2JNJ9 132 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 A0A1W2PS18 150 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 CDKN1BP46527 198 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 EIF4EBP1Q13541 118 aaPredicted RBP12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 IGFL3Q6UXB1 125 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 DOLPP1Q86YN1 238 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 ZBTB34Q8NCN2 500 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 ZNF586Q9NXT0 402 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 Q9UFV3 132 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 YTHDF2Q9Y5A9 579 aaKnown RBP12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 ITGB1BP1O14713 200 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 ADH4P08319 380 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 P0C879 139 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 PRB3Q04118 309 aaPredicted RBP12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 MZT1Q08AG7 82 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 GFRALQ6UXV0 394 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 S1PR3Q99500 378 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 ALKBH7Q9BT30 221 aaPredicted RBP12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 DYSFO75923 2080 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 PIGBOS1A0A0B4J2F0 54 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 PRRG2O14669 202 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 C3orf79P0CE67 100 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 VWC2Q2TAL6 325 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 LCN12Q6JVE5 192 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 OR8I2Q8N0Y5 310 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 UHRF2Q96PU4 802 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 A0A1W2PPV4 95 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 CLEC2AQ6UVW9 174 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 CCL17Q92583 94 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 RNF7Q9UBF6 113 aa12.74□□□□□ -0.37
SHROOM1-201ENST00000319854 K7EP13 123 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 LOXL3P58215 753 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 CT45A1Q5HYN5 189 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 NIT1Q86X76 327 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 CT45A3Q8NHU0 189 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 FAM57AQ8TBR7 257 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 IFI27L2Q9H2X8 130 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 REG1BP48304 166 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 ERVK-16P61578 105 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 ASCL5Q7RTU5 278 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 MMD2Q8IY49 270 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 COX11Q9Y6N1 276 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 SAA2-SAA4A0A096LPE2 208 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 M0QZ24 198 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 RAB29O14966 203 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 ZNF253O75346 499 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 TOMM40O96008 361 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 FAM87AP0C7U9 286 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 SAA2P0DJI9 122 aaPredicted RBP12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 RPL31P62899 125 aaKnown RBP12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 TP73-AS1Q9UF72 201 aa12.73□□□□□ -0.37
SHROOM1-201ENST00000319854 TET2Q6N021 2002 aaPredicted RBP12.72□□□□□ -0.37
SHROOM1-201ENST00000319854 C15orf62A8K5M9 175 aa12.72□□□□□ -0.37
SHROOM1-201ENST00000319854 TSPOP30536 169 aa12.72□□□□□ -0.37
SHROOM1-201ENST00000319854 HTD2P86397 168 aa12.72□□□□□ -0.37
SHROOM1-201ENST00000319854 BSPH1Q075Z2 132 aa12.72□□□□□ -0.37
SHROOM1-201ENST00000319854 TMEM140Q9NV12 185 aa12.72□□□□□ -0.37
SHROOM1-201ENST00000319854 NAT8BQ9UHF3 227 aa12.72□□□□□ -0.37
SHROOM1-201ENST00000319854 C17orf112F2Z3M2 114 aa12.72□□□□□ -0.37
SHROOM1-201ENST00000319854 SSMEM1Q8WWF3 244 aa12.72□□□□□ -0.37
SHROOM1-201ENST00000319854 NEUROG1Q92886 237 aa12.72□□□□□ -0.37
SHROOM1-201ENST00000319854 SFXN3Q9BWM7 321 aa12.72□□□□□ -0.37
SHROOM1-201ENST00000319854 TRGV10A0A0A0MS01 117 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 DPRXA6NFQ7 191 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 C17orf58Q2M2W7 97 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 H1FXQ92522 213 aaKnown RBP12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 FAM122AQ96E09 287 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 V9GYV3 84 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 NAV3Q8IVL0 2385 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 C16orf97H3BN30 126 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 CD1BP29016 333 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 S100A7P31151 101 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 SPATA31B1PQ5VZV4 182 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 MIC13Q5XKP0 118 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 JPT1Q9UK76 154 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 WDR83OSQ9Y284 106 aa12.71□□□□□ -0.37
SHROOM1-201ENST00000319854 MALRD1Q5VYJ5 2156 aa12.71□□□□□ -0.38
SHROOM1-201ENST00000319854 ASPHD1Q5U4P2 390 aa12.71□□□□□ -0.38
SHROOM1-201ENST00000319854 TMEM108Q6UXF1 575 aa12.71□□□□□ -0.38
SHROOM1-201ENST00000319854 RNF24Q9Y225 148 aa12.71□□□□□ -0.38
SHROOM1-201ENST00000319854 FOXH1O75593 365 aa12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 CCL3L1P16619 93 aa12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 PRRX1P54821 245 aa12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 SCNM1Q9BWG6 230 aa12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 TNFSF4P23510 183 aa12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 DLX1P56177 255 aa12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 TCL1AP56279 114 aa12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 IGF2-ASQ6U949 168 aa12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 ZNF738Q8NE65 137 aa12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 RAB1CQ92928 201 aa12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 RALYQ9UKM9 306 aaKnown RBP12.7□□□□□ -0.38
SHROOM1-201ENST00000319854 IGLV3-9A0A075B6K5 115 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 LHBP01229 141 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 STAG3L2P0CL84 134 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms