RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 XKRY2A2RUG3 117 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 TMEM8BA6NDV4 472 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 IGHV3-23P01764 117 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 PAX5Q02548 391 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 C16orf82Q7Z2V1 217 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 PAXXQ9BUH6 204 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 NAT8Q9UHE5 227 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 FAM74A7A6NL05 159 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 SOD3P08294 240 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 WNT2P09544 360 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 FAM74A3Q4VXF1 159 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 ZNF880Q6PDB4 577 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 RNF2Q99496 336 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 PSMG3Q9BT73 122 aaPredicted RBP7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 IGHV3OR16-8A0A075B7F1 116 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 IL6RP08887 468 aaPredicted RBP7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 RD3LP0DJH9 198 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 ZNF134P52741 427 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 GUSBP1Q15486 140 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 PPP1R27Q86WC6 154 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 Q8TCH9 128 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 CORTO00230 105 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 TCL1AP56279 114 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 SELENOTP62341 195 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 SRSF3P84103 164 aaKnown RBP7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 ADORA2A-AS1P86434 159 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 SLC25A48Q6ZT89 311 aaKnown RBP7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 CENPVQ7Z7K6 275 aaPredicted RBP7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 HIGD1AQ9Y241 93 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 ZNF705GA8MUZ8 300 aaPredicted RBP7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 G3V3Q6 166 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 PPP1R2P9O14990 202 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 OR2J3O76001 311 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 SMIM17P0DL12 118 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 GALR1P47211 349 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 PAFAH1B2P68402 229 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 SRSF4Q08170 494 aaKnown RBP7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 FABP9Q0Z7S8 132 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 C17orf58Q2M2W7 97 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 GCSAMLQ5JQS6 135 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 SRSF12Q8WXF0 261 aaKnown RBP7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 DNAJC4Q9NNZ3 241 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 AUP1Q9Y679 476 aa7.62□□□□□ -1.19
TMEM39A-201ENST00000319172 IGHV3OR16-13A0A075B7E8 117 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 IGHV3-74A0A0B4J1X5 117 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 C15orf65H3BRN8 121 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 TMEM50AO95807 157 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 IGKV1-39P01597 117 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 IGKV1D-39P04432 117 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 CRIP3Q6Q6R5 217 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 TMEM37Q8WXS4 190 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 CHRDL1Q9BU40 450 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 HELTA6NFD8 242 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 S100A8P05109 93 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 LOXP28300 417 aaPredicted RBP7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 OR4A5Q8NH83 315 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 BTF3L4Q96K17 158 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 SGK494Q96LW2 274 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 VSIRQ9H7M9 311 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 TRAV40A0A0B4J280 105 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 TEX50A0A1B0GTY4 177 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 WDR73Q6P4I2 378 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 SPXQ9BT56 116 aa7.61□□□□□ -1.19
TMEM39A-201ENST00000319172 TNCP24821 2201 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 NBR2O15453 112 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 FCGR2BP31994 310 aaPredicted RBP7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 CCL20P78556 96 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 PNRC1Q12796 327 aaPredicted RBP7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 FAM210BQ96KR6 192 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 IGHV1-3A0A0C4DH29 117 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 F5H697 171 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 H0YJW9 148 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 MDKP21741 143 aaPredicted RBP7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 PRCDQ00LT1 54 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 VMO1Q7Z5L0 202 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 PDE6DO43924 150 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 C8orf88P0DMB2 117 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 RELBQ01201 579 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 EFNB3Q15768 340 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 TMEM155Q4W5P6 130 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 PQLC2Q6ZP29 291 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 WNT10AQ9GZT5 417 aa7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 USP9XQ93008 2570 aaPredicted RBP7.6□□□□□ -1.19
TMEM39A-201ENST00000319172 ZNF98A6NK75 572 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 MFAP4P55083 255 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 TEX36Q5VZQ5 186 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 ATRAIDQ6UW56 229 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 BRD3OSQ6XYD6 125 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 OR10G8Q8NGN5 311 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 PKD1L2Q7Z442 2459 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 A6NNC1 897 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 A8MXK9 166 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 STXBP6Q8NFX7 210 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 CTSZQ9UBR2 303 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 LINC00527Q9UJ94 153 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 WDFY4Q6ZS81 3184 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 IGHV3-49A0A0A0MS15 119 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 IL4P05112 153 aa7.59□□□□□ -1.19
TMEM39A-201ENST00000319172 CYP2G1PQ6ZSU1 146 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms