RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 SEC11AP67812 179 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 DRAM1Q8N682 238 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 PRSS53Q2L4Q9 553 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 LAIR2Q6ISS4 152 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 TMEM186Q96B77 213 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 RBMY1BA6NDE4 496 aaKnown RBP7.41□□□□□ -1.22
USF3-201ENST00000316407 RBMY1EA6NEQ0 496 aaKnown RBP7.41□□□□□ -1.22
USF3-201ENST00000316407 IGKCP01834 107 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 RBMY1DP0C7P1 496 aaKnown RBP7.41□□□□□ -1.22
USF3-201ENST00000316407 RBMY1A1P0DJD3 496 aaKnown RBP7.41□□□□□ -1.22
USF3-201ENST00000316407 RBMY1CP0DJD4 496 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 MC5RP33032 325 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 TMEM256Q8N2U0 113 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 COLCA2A8K830 154 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 C17orf51A8MQB3 221 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 PIN1P1O15428 100 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 BTCP35070 178 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 PSG4Q00888 419 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 HSD52Q0P140 79 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 SCRT1Q9BWW7 348 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 DLL3Q9NYJ7 618 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 MIR17HGQ75NE6 70 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 MS4A5Q9H3V2 200 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 PROB1E7EW31 1015 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 ZIC1Q15915 447 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 SORL1Q92673 2214 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 CD200R1LQ6Q8B3 271 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 M0R2P5 195 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 MPV17P39210 176 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 DUX5Q96PT3 197 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 RTBDNQ9BSG5 229 aaPredicted RBP7.41□□□□□ -1.22
USF3-201ENST00000316407 GTSCR1Q86UQ5 136 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
USF3-201ENST00000316407 ZNF625Q96I27 306 aaPredicted RBP7.41□□□□□ -1.22
USF3-201ENST00000316407 Q9H3A6 140 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 PLXNB3Q9ULL4 1909 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 TRBV5-7A0A0A0MS05 114 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 UMODP07911 640 aa7.41□□□□□ -1.22
USF3-201ENST00000316407 TNFSF13O75888 250 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 PCSK4Q6UW60 755 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 APOBEC4Q8WW27 367 aaKnown RBP7.4□□□□□ -1.22
USF3-201ENST00000316407 MGST2Q99735 147 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 A0A0G2JMZ2 1700 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 LRRC37A2A6NM11 1700 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 LRRC37AA6NMS7 1700 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 SHISA3A0PJX4 238 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 ZNF146Q15072 292 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 LINC01465Q8N7H1 131 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 CLEC7AQ9BXN2 247 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 CD3EP07766 207 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 PRSS57Q6UWY2 283 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 A0A1B0GUS0 222 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 OR52E5Q8NH55 327 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 MRPL32Q9BYC8 188 aaKnown RBP7.4□□□□□ -1.22
USF3-201ENST00000316407 MBNL3Q9NUK0 354 aaKnown RBP7.4□□□□□ -1.22
USF3-201ENST00000316407 SPINT1O43278 529 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 HBDP02042 147 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 MALP21145 153 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 LHX8Q68G74 356 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 C1QL2Q7Z5L3 287 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 BCL6BQ8N143 479 aaPredicted RBP7.4□□□□□ -1.22
USF3-201ENST00000316407 FER1L6-AS1Q8NA97 138 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 RNF126Q9BV68 326 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 MRPL20Q9BYC9 149 aaKnown RBP7.4□□□□□ -1.22
USF3-201ENST00000316407 CST9LQ9H4G1 147 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 ERVK11-1P61568 191 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 RNF182Q8N6D2 247 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 DLX4Q92988 240 aaPredicted RBP7.4□□□□□ -1.22
USF3-201ENST00000316407 PEBP1P30086 187 aaKnown RBP7.4□□□□□ -1.22
USF3-201ENST00000316407 PPIFP30405 207 aaKnown RBP7.4□□□□□ -1.22
USF3-201ENST00000316407 ASIPP42127 132 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 SNRPD3P62318 126 aaKnown RBP7.4□□□□□ -1.22
USF3-201ENST00000316407 CT55Q8WUE5 264 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 GNB1LQ9BYB4 327 aa7.4□□□□□ -1.22
USF3-201ENST00000316407 CHTOPQ9Y3Y2 248 aaKnown RBP7.4□□□□□ -1.22
USF3-201ENST00000316407 NCR2O95944 276 aa7.4□□□□□ -1.23
USF3-201ENST00000316407 LY6EQ16553 131 aa7.4□□□□□ -1.23
USF3-201ENST00000316407 A0A1W2PPV9 198 aa7.4□□□□□ -1.23
USF3-201ENST00000316407 ZNF721Q8TF20 911 aa7.4□□□□□ -1.23
USF3-201ENST00000316407 TUBA4BQ9H853 241 aa7.4□□□□□ -1.23
USF3-201ENST00000316407 IGHV1OR21-1A0A087WYE8 117 aa7.4□□□□□ -1.23
USF3-201ENST00000316407 SLC25A20O43772 301 aa7.4□□□□□ -1.23
USF3-201ENST00000316407 TDGF1P3P51864 188 aa7.4□□□□□ -1.23
USF3-201ENST00000316407 GTF3AQ92664 365 aaKnown RBP7.4□□□□□ -1.23
USF3-201ENST00000316407 FOXA2Q9Y261 457 aaPredicted RBP7.4□□□□□ -1.23
USF3-201ENST00000316407 KLF12Q9Y4X4 402 aa7.4□□□□□ -1.23
USF3-201ENST00000316407 IGHV3OR16-10A0A075B7F0 116 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 A0A0J9YW62 118 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 NBEAP1P0C6P0 100 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 PAPPA-AS1Q5QFB9 102 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 CD69Q07108 199 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 COX14Q96I36 57 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 GDF15Q99988 308 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 KIR3DL3Q8N743 410 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 CCL20P78556 96 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 SPEM2Q0P670 501 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 C2orf82Q6UX34 121 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 LHX2P50458 406 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 ATXN8Q156A1 80 aa7.39□□□□□ -1.23
USF3-201ENST00000316407 GATD1Q8NB37 220 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms