RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 EFNA4P52798 201 aa9.98□□□□□ -0.81
AMBRA1-201ENST00000314845 ZNF600Q6ZNG1 722 aa9.98□□□□□ -0.81
AMBRA1-201ENST00000314845 OR4D5Q8NGN0 318 aa9.98□□□□□ -0.81
AMBRA1-201ENST00000314845 RPUSD1Q9UJJ7 312 aaKnown RBP9.98□□□□□ -0.81
AMBRA1-201ENST00000314845 NOTCH3Q9UM47 2321 aa9.98□□□□□ -0.81
AMBRA1-201ENST00000314845 A0A1B0GUT8 65 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 H3BVH4 76 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 TCTAP57738 103 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 MDS2Q8NDY4 140 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 NABP1Q96AH0 204 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 SLC50A1Q9BRV3 221 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 TNFRSF18Q9Y5U5 241 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 SCN5AQ14524 2016 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 C20orf204Q6ZNR8 217 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 SMIM12Q96EX1 92 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 FMC1Q96HJ9 113 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 SOX21Q9Y651 276 aaPredicted RBP9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 DUTP33316 252 aaKnown RBP9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 VDAC2P45880 294 aaPredicted RBP9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 IFITM2Q01629 132 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 BMPERQ8N8U9 685 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 DMRTA2Q96SC8 542 aa9.97□□□□□ -0.81
AMBRA1-201ENST00000314845 IGHV3OR16-8A0A075B7F1 116 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 TIMM23O14925 209 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 TCF21O43680 179 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 OR9G9P0C7N8 305 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 MEIG1Q5JSS6 88 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 SLC25A34Q6PIV7 304 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 TMEM136Q6ZRR5 245 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 Q6ZS92 163 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 PAQR4Q8N4S7 273 aaPredicted RBP9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 LRTM2Q8N967 370 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 DUX3Q96PT4 197 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 UQCR10Q9UDW1 63 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 A0A1B0GW15 77 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 FAM90A9PA6NNJ1 464 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 MPTX1A8MV57 137 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 PAX1P15863 534 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 PLAURQ03405 335 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 SPATA45Q537H7 98 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 C18orf12Q96KH6 178 aa9.96□□□□□ -0.81
AMBRA1-201ENST00000314845 RNF222A6NCQ9 220 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 MPZP25189 248 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 PRCDQ00LT1 54 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 MIR17HGQ75NE6 70 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 ZNF256Q9Y2P7 627 aaPredicted RBP9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 SLC25A15Q9Y619 301 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 RHOGP84095 191 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 UNQ6494/PRO21346Q6UXR6 183 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 HEPN1Q6WQI6 88 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 REC114Q7Z4M0 266 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 RNF125Q96EQ8 232 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 WFIKKN1Q96NZ8 548 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 IL36BQ9NZH7 164 aa9.96□□□□□ -0.82
AMBRA1-201ENST00000314845 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.95□□□□□ -0.823e-8■■■■■ 33.3
AMBRA1-201ENST00000314845 WNT2P09544 360 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 GATA2P23769 480 aaPredicted RBP9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 SUMO2P61956 95 aaKnown RBP9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 ID3Q02535 119 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 Q0VFX4 171 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 SRSF7Q16629 238 aaKnown RBP eCLIP9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 HIST1H4GQ99525 98 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 Q9H3A6 140 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 OTORQ9NRC9 128 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 USF3Q68DE3 2245 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 IGKV1-12A0A0C4DH73 117 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 IGKV3OR2-268A0A0C4DH90 116 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 MBD3L4A6NDZ8 208 aaPredicted RBP9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 MBD3L3A6NE82 208 aaPredicted RBP9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 MBD3L5A6NJ08 208 aaPredicted RBP9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 TMEM262E9PQX1 116 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 IGKV1D-12P01611 117 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 CBLN1P23435 193 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 EFNB1P98172 346 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 ZNF324BQ6AW86 544 aaPredicted RBP9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 MBD3L2Q8NHZ7 208 aaPredicted RBP9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 PRELID3AQ96N28 172 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 GPR61Q9BZJ8 451 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 TRAV40A0A0B4J280 105 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 LOC107984156A0A0G2JMH3 177 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 SCO2A0A1W2PP80 73 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 OOSP1A8MZH6 123 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 FOXA3P55318 350 aaPredicted RBP9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 ARL17AQ8IVW1 177 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 TMEM101Q96IK0 257 aa9.95□□□□□ -0.82
AMBRA1-201ENST00000314845 OR11H12B2RN74 326 aa9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 OR11H1Q8NG94 326 aa9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 OR11H2Q8NH07 326 aa9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 C8orf46Q8TAG6 207 aa9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 ASCL2Q99929 193 aa9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 RPP21Q9H633 154 aaKnown RBP9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 A0A087WV48 116 aa9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 CDX1P47902 265 aaPredicted RBP9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 LINC01587Q99440 93 aa9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 SDF2L1Q9HCN8 221 aa9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 MRPS16Q9Y3D3 137 aaKnown RBP9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 A0A1W2PRX2 142 aa9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 GRIFINA4D1Z8 144 aa9.94□□□□□ -0.82
AMBRA1-201ENST00000314845 DUSP14O95147 198 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms