RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TMEM30BQ3MIR4 351 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 MIDNQ504T8 468 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 ZNF626Q68DY1 528 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 BRD3OSQ6XYD6 125 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 Q6ZS49 121 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 PDZD9Q8IXQ8 264 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 PNKDQ8N490 385 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 ADAD2Q8NCV1 583 aaKnown RBP6.61□□□□□ -1.35
CHD6-201ENST00000309279 OR1B1Q8NGR6 318 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 RNF183Q96D59 192 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 GRAMD2BQ96HH9 432 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 KCNIP1Q9NZI2 227 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 METTL1Q9UBP6 276 aaKnown RBP6.61□□□□□ -1.35
CHD6-201ENST00000309279 SCP2D1Q9UJQ7 156 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 WDR83OSQ9Y284 106 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 A3GALT2U3KPV4 340 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 IGHV3OR16-10A0A075B7F0 116 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 A0A0A0MQY5 61 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 RPS10-NUDT3A0A1W2PQS6 291 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 TMEM235A6NFC5 223 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 NPFFO15130 113 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 SPRY2O43597 315 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 NUDT3O95989 172 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 CA1P00915 261 aaPredicted RBP6.61□□□□□ -1.35
CHD6-201ENST00000309279 IGLV1-47P01700 117 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 HLA-DQB1P01920 261 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 FCGR3AP08637 254 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 PPIFP30405 207 aaKnown RBP6.61□□□□□ -1.35
CHD6-201ENST00000309279 MNDAP41218 407 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 TCTAP57738 103 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 UBE2V1Q13404 147 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 ARFRP1Q13795 201 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 TMEM69Q5SWH9 247 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 RUSC1-AS1Q66K80 236 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 BAP18Q8IXM2 172 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 OR1L1Q8NH94 360 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 TERB2Q8NHR7 220 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 PCNPQ8WW12 178 aaKnown RBP6.61□□□□□ -1.35
CHD6-201ENST00000309279 SSMEM1Q8WWF3 244 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 GALMQ96C23 342 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 SUCNR1Q9BXA5 334 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 CLEC7AQ9BXN2 247 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 C5orf66Q9H5L9 145 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 Q9H8V8 135 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 OR1A1Q9P1Q5 309 aa6.61□□□□□ -1.35
CHD6-201ENST00000309279 C2CD3Q4AC94 2353 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 ANKRD20A5PA0PJZ0 165 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 J3QR06 171 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 DNASE2O00115 360 aaPredicted RBP6.6□□□□□ -1.35
CHD6-201ENST00000309279 MPDU1O75352 247 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 COX7A1P24310 79 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 NFYBP25208 207 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 SAA4P35542 130 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 TAS2R20P59543 309 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 HLA-DRB3P79483 266 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 LDLRAD2Q5SZI1 272 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 TMEM78Q5T7P6 136 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 C5orf24Q7Z6I8 188 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 LINC01551Q86U37 167 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 LYG1Q8N1E2 194 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 LINC00311Q8N616 119 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 OR9G1Q8NH87 305 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 TCTEX1D2Q8WW35 142 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 SNAPC3Q92966 411 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 ZNF286AQ9HBT8 521 aa6.6□□□□□ -1.35
CHD6-201ENST00000309279 ZNF230Q9UIE0 474 aaPredicted RBP6.6□□□□□ -1.35
CHD6-201ENST00000309279 SOX21Q9Y651 276 aaPredicted RBP6.6□□□□□ -1.35
CHD6-201ENST00000309279 IGKV1-6A0A0C4DH72 117 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 SDCBPO00560 298 aaPredicted RBP6.59□□□□□ -1.35
CHD6-201ENST00000309279 YPEL1O60688 119 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 SCTP09683 121 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 PTHLHP12272 177 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 GATA1P15976 413 aaPredicted RBP6.59□□□□□ -1.35
CHD6-201ENST00000309279 PAFAH1B2P68402 229 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 C4orf26Q17RF5 130 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 HLA-DRB5Q30154 266 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 MORN2Q502X0 79 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 MINOS1Q5TGZ0 78 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 FAM19A5Q7Z5A7 132 aaPredicted RBP6.59□□□□□ -1.35
CHD6-201ENST00000309279 SNX29P2Q8IUI4 249 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 ZNF439Q8NDP4 499 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 MCFD2Q8NI22 146 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 UBALD1Q8TB05 177 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 GATAD1Q8WUU5 269 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 MALSU1Q96EH3 234 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 YPEL2Q96QA6 119 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 S1PR3Q99500 378 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 GINS3Q9BRX5 216 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 MEGF9Q9H1U4 602 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 PRO0628Q9UI54 55 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 MINOS1-NBL1R4GNA1 71 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 ATRQ13535 2644 aa6.59□□□□□ -1.35
CHD6-201ENST00000309279 IGKV1D-8A0A087WSZ0 117 aa6.58□□□□□ -1.36
CHD6-201ENST00000309279 CXorf65A6NEN9 183 aa6.58□□□□□ -1.36
CHD6-201ENST00000309279 KRBOX1C9JBD0 128 aa6.58□□□□□ -1.36
CHD6-201ENST00000309279 G3V4G9 280 aa6.58□□□□□ -1.36
CHD6-201ENST00000309279 LY6LH3BQJ8 138 aa6.58□□□□□ -1.36
CHD6-201ENST00000309279 BUB1B-PAK6H3BSN5 160 aa6.58□□□□□ -1.36
CHD6-201ENST00000309279 FABP7O15540 132 aa6.58□□□□□ -1.36
CHD6-201ENST00000309279 MBPP02686 304 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms