RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 COLQQ9Y215 455 aaPredicted RBP10.61□□□□□ -0.71
USP38-201ENST00000307017 C21orf140B9A014 251 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 ANK1P16157 1881 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 SHANK3Q9BYB0 1731 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 ACP7Q6ZNF0 438 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 C1orf174Q8IYL3 243 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 ZNF257Q9Y2Q1 563 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 HS3ST3B1Q9Y662 390 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 GREB1Q4ZG55 1949 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 MC5RP33032 325 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 NR2C2APQ86WQ0 139 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 OCIAD2Q56VL3 154 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 EXOC3-AS1Q8N2X6 119 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 NPIPB13A6NJU9 1138 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 NPIPB5A8MRT5 1133 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 CEACAM1P13688 526 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 CACNA1IQ9P0X4 2223 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 DOCK9Q9BZ29 2069 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 KLRD1Q13241 179 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 ANXA2RQ3ZCQ2 193 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 PLPPR1Q8TBJ4 325 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 TPRP12270 2363 aaKnown RBP10.6□□□□□ -0.71
USP38-201ENST00000307017 RNF222A6NCQ9 220 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 LINC01590Q5TEZ4 76 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 SMRP1Q8NCR6 262 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 YAE1D1Q9NRH1 226 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 PAPPA2Q9BXP8 1791 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 A0A1B0GUS0 222 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 WISP3O95389 354 aaPredicted RBP10.6□□□□□ -0.71
USP38-201ENST00000307017 TMEM42Q69YG0 159 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 LRTM2Q8N967 370 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 PATJQ8NI35 1801 aa10.6□□□□□ -0.71
USP38-201ENST00000307017 TDGF1P3P51864 188 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 PPP1R27Q86WC6 154 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 CHTOPQ9Y3Y2 248 aaKnown RBP10.59□□□□□ -0.71
USP38-201ENST00000307017 PSME4Q14997 1843 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 SAA2-SAA4A0A096LPE2 208 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 LIPFP07098 398 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 SAA2P0DJI9 122 aaPredicted RBP10.59□□□□□ -0.71
USP38-201ENST00000307017 C1orf162Q8NEQ5 155 aaPredicted RBP10.59□□□□□ -0.71
USP38-201ENST00000307017 IFI27L2Q9H2X8 130 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 DOCK11Q5JSL3 2073 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 A0A1W2PQM1 296 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 PRR33A8MZF0 331 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 C1orf53Q5VUE5 145 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 RNF126Q9BV68 326 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 ZNF581Q9P0T4 197 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 FANCMQ8IYD8 2048 aa10.59□□□□□ -0.71
USP38-201ENST00000307017 A0A0A6YYD4 124 aa10.58□□□□□ -0.71
USP38-201ENST00000307017 A0A1B0GUT8 65 aa10.58□□□□□ -0.71
USP38-201ENST00000307017 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.58□□□□□ -0.71
USP38-201ENST00000307017 OR9G9P0C7N8 305 aa10.58□□□□□ -0.71
USP38-201ENST00000307017 RPL35AP18077 110 aaKnown RBP10.58□□□□□ -0.71
USP38-201ENST00000307017 SRSF8Q9BRL6 282 aaKnown RBP10.58□□□□□ -0.71
USP38-201ENST00000307017 GLI3P10071 1580 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 TRAV8-1A0A0A6YYK1 113 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 CFAP161Q6P656 301 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 LINC00158P58513 81 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 TEX29Q8N6K0 151 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 OCC1Q8TAD7 63 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 SDF2L1Q9HCN8 221 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 PI4KAP42356 2102 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 IZUMO1RA6ND01 250 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 TCRAP04437 139 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 CD28P10747 220 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 FHL5Q5TD97 284 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 COLCA1Q6ZS62 124 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 LYZL4Q96KX0 146 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 EPDR1Q9UM22 224 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 RS1O15537 224 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 ARPC1AQ92747 370 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 TMEM54Q969K7 222 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 IGKV1D-8A0A087WSZ0 117 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 PSG1P11464 419 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 RNF115Q9Y4L5 304 aa10.58□□□□□ -0.72
USP38-201ENST00000307017 CECR9P0C854 216 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 TSPOP30536 169 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 SUMO4Q6EEV6 95 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 PRSS57Q6UWY2 283 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 CIARTQ8N365 385 aaPredicted RBP10.57□□□□□ -0.72
USP38-201ENST00000307017 HIST1H2BKO60814 126 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 HIST1H2BJP06899 126 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 HIST1H2BOP23527 126 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 HIST1H2BBP33778 126 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 HIST1H2BDP58876 126 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 HIST1H2BCP62807 126 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 HIST2H2BEQ16778 126 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.57□□□□□ -0.72
USP38-201ENST00000307017 C10orf55Q5SWW7 151 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 TPTE2P1Q5T6R2 138 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 SAMD5Q5TGI4 173 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 HIST1H2BHQ93079 126 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 HIST1H2BNQ99877 126 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 HIST1H2BMQ99879 126 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 TAF1LQ8IZX4 1826 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 GLRXP35754 106 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 CFHR3Q02985 330 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 RNF144BQ7Z419 303 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 TMEM14DPA8MWL7 114 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 SELLP14151 372 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms