RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 RPEL1Q2QD12 228 aa12.32□□□□□ -0.44
CSDC2-201ENST00000306149 ZNF503Q96F45 646 aa12.32□□□□□ -0.44
CSDC2-201ENST00000306149 ADTRPQ96IZ2 230 aa12.32□□□□□ -0.44
CSDC2-201ENST00000306149 MRPL20Q9BYC9 149 aaKnown RBP12.32□□□□□ -0.44
CSDC2-201ENST00000306149 CBLN4Q9NTU7 201 aa12.32□□□□□ -0.44
CSDC2-201ENST00000306149 TRBV9A0A0B4J1U6 114 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 IRF2P14316 349 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 CHRNB4P30926 498 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 DIAPH2-AS1Q14236 149 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 POU2AF1Q16633 256 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 RTL8BQ17RB0 113 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 DOLPP1Q86YN1 238 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 RBMXL3Q8N7X1 1067 aaKnown RBP12.31□□□□□ -0.44
CSDC2-201ENST00000306149 OR1L6Q8NGR2 347 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 FCN3O75636 299 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 CRISP2P16562 243 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 RANP62826 216 aaKnown RBP12.31□□□□□ -0.44
CSDC2-201ENST00000306149 Q6ZS92 163 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 Q6ZWC4 215 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 OR2T6Q8NHC8 308 aa12.31□□□□□ -0.44
CSDC2-201ENST00000306149 M0R143 59 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 TM4SF5O14894 197 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 TNFSF4P23510 183 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 SLC35B1P78383 322 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 KRTCAP3Q53RY4 240 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 PQLC2Q6ZP29 291 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 TBX15Q96SF7 602 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 V9GYV3 84 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 CEP295Q9C0D2 2601 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 TRAV5A0A0B4J249 113 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 RAB4AP20338 218 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 IER3P46695 156 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 BPIFB3P59826 476 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 FXYD3Q14802 87 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 CENPWQ5EE01 88 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 MORN5Q5VZ52 161 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 TEX43Q6ZNM6 134 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 RNASE7Q9H1E1 156 aaKnown RBP12.3□□□□□ -0.44
CSDC2-201ENST00000306149 TMEM167BQ9NRX6 74 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 RELNP78509 3460 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 hADV38S2A0JD32 116 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 HELTA6NFD8 242 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 ZNF705FA8MVS1 300 aaPredicted RBP12.3□□□□□ -0.44
CSDC2-201ENST00000306149 SERF1AO75920 110 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 ZNF705DP0CH99 300 aaPredicted RBP12.3□□□□□ -0.44
CSDC2-201ENST00000306149 ZNF705BP0CI00 300 aaPredicted RBP12.3□□□□□ -0.44
CSDC2-201ENST00000306149 G0S2P27469 103 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 SUMO1P63165 101 aaKnown RBP12.3□□□□□ -0.44
CSDC2-201ENST00000306149 SSBP2P81877 361 aaPredicted RBP12.3□□□□□ -0.44
CSDC2-201ENST00000306149 Q0VG73 95 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 MRPL52Q86TS9 123 aaKnown RBP12.3□□□□□ -0.44
CSDC2-201ENST00000306149 MMD2Q8IY49 270 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 HARBI1Q96MB7 349 aa12.3□□□□□ -0.44
CSDC2-201ENST00000306149 F2Z2F3 143 aa12.29□□□□□ -0.44
CSDC2-201ENST00000306149 RNASE2P10153 161 aaKnown RBP12.29□□□□□ -0.44
CSDC2-201ENST00000306149 C10orf55Q5SWW7 151 aa12.29□□□□□ -0.44
CSDC2-201ENST00000306149 TPTE2P1Q5T6R2 138 aa12.29□□□□□ -0.44
CSDC2-201ENST00000306149 IGFL3Q6UXB1 125 aa12.29□□□□□ -0.44
CSDC2-201ENST00000306149 OR8I2Q8N0Y5 310 aa12.29□□□□□ -0.44
CSDC2-201ENST00000306149 H1FXQ92522 213 aaKnown RBP12.29□□□□□ -0.44
CSDC2-201ENST00000306149 ZNF257Q9Y2Q1 563 aa12.29□□□□□ -0.44
CSDC2-201ENST00000306149 FCN1O00602 326 aa12.29□□□□□ -0.44
CSDC2-201ENST00000306149 GNG4P50150 75 aa12.29□□□□□ -0.44
CSDC2-201ENST00000306149 TCL1AP56279 114 aa12.29□□□□□ -0.44
CSDC2-201ENST00000306149 SLC35E1Q96K37 410 aa12.29□□□□□ -0.44
CSDC2-201ENST00000306149 GNB1LQ9BYB4 327 aa12.29□□□□□ -0.44
CSDC2-201ENST00000306149 GGTLC3B5MD39 225 aa12.28□□□□□ -0.44
CSDC2-201ENST00000306149 CEACAM8P31997 349 aaPredicted RBP12.28□□□□□ -0.44
CSDC2-201ENST00000306149 TOMM20LQ6UXN7 152 aa12.28□□□□□ -0.44
CSDC2-201ENST00000306149 CCL17Q92583 94 aa12.28□□□□□ -0.44
CSDC2-201ENST00000306149 C20orf144Q9BQM9 153 aa12.28□□□□□ -0.44
CSDC2-201ENST00000306149 SNURFLB1AK76 121 aa12.28□□□□□ -0.44
CSDC2-201ENST00000306149 KLK10O43240 276 aa12.28□□□□□ -0.44
CSDC2-201ENST00000306149 NHLRC2Q8NBF2 726 aa12.28□□□□□ -0.44
CSDC2-201ENST00000306149 SVIPQ8NHG7 77 aa12.28□□□□□ -0.44
CSDC2-201ENST00000306149 ATG101Q9BSB4 218 aa12.28□□□□□ -0.44
CSDC2-201ENST00000306149 COMMD5Q9GZQ3 224 aa12.28□□□□□ -0.44
CSDC2-201ENST00000306149 TECRQ9NZ01 308 aaKnown RBP12.28□□□□□ -0.44
CSDC2-201ENST00000306149 DPRXA6NFQ7 191 aa12.27□□□□□ -0.44
CSDC2-201ENST00000306149 TDGF1P3P51864 188 aa12.27□□□□□ -0.44
CSDC2-201ENST00000306149 ADIPOQQ15848 244 aa12.27□□□□□ -0.44
CSDC2-201ENST00000306149 TMEM200BQ69YZ2 307 aa12.27□□□□□ -0.44
CSDC2-201ENST00000306149 LYPD2Q6UXB3 125 aa12.27□□□□□ -0.44
CSDC2-201ENST00000306149 LINC00479Q96M42 142 aa12.27□□□□□ -0.44
CSDC2-201ENST00000306149 LINC00312Q9Y6C7 94 aa12.27□□□□□ -0.44
CSDC2-201ENST00000306149 LRBAP50851 2863 aa12.27□□□□□ -0.45
CSDC2-201ENST00000306149 MT-ND6P03923 174 aa12.27□□□□□ -0.45
CSDC2-201ENST00000306149 C2orf83Q53S99 150 aa12.27□□□□□ -0.45
CSDC2-201ENST00000306149 TEX36Q5VZQ5 186 aa12.27□□□□□ -0.45
CSDC2-201ENST00000306149 PNKDQ8N490 385 aa12.27□□□□□ -0.45
CSDC2-201ENST00000306149 OR5AU1Q8NGC0 362 aa12.27□□□□□ -0.45
CSDC2-201ENST00000306149 HSPB9Q9BQS6 159 aa12.27□□□□□ -0.45
CSDC2-201ENST00000306149 LINC00574Q9H8X3 128 aa12.27□□□□□ -0.45
CSDC2-201ENST00000306149 TLN1Q9Y490 2541 aaKnown RBP12.27□□□□□ -0.45
CSDC2-201ENST00000306149 A0A0G2JNJ9 132 aa12.26□□□□□ -0.45
CSDC2-201ENST00000306149 ATP5IP56385 69 aaPredicted RBP12.26□□□□□ -0.45
CSDC2-201ENST00000306149 RPL19P84098 196 aaKnown RBP12.26□□□□□ -0.45
CSDC2-201ENST00000306149 PRB3Q04118 309 aaPredicted RBP12.26□□□□□ -0.45
CSDC2-201ENST00000306149 WDR73Q6P4I2 378 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms