RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 GATCO43716 136 aaKnown RBP9.15□□□□□ -0.94
SCG2-201ENST00000305409 IFNA1P01562 189 aa9.15□□□□□ -0.94
SCG2-201ENST00000305409 NEU4Q8WWR8 484 aaPredicted RBP9.15□□□□□ -0.94
SCG2-201ENST00000305409 SAV1Q9H4B6 383 aaPredicted RBP9.15□□□□□ -0.94
SCG2-201ENST00000305409 UNKLQ9H9P5 680 aaKnown RBP9.15□□□□□ -0.94
SCG2-201ENST00000305409 LPAR2Q9HBW0 351 aa9.15□□□□□ -0.94
SCG2-201ENST00000305409 LY86O95711 162 aa9.15□□□□□ -0.95
SCG2-201ENST00000305409 NPPCP23582 126 aa9.15□□□□□ -0.95
SCG2-201ENST00000305409 MC5RP33032 325 aa9.15□□□□□ -0.95
SCG2-201ENST00000305409 RHEBQ15382 184 aa9.15□□□□□ -0.95
SCG2-201ENST00000305409 C2orf83Q53S99 150 aa9.15□□□□□ -0.95
SCG2-201ENST00000305409 MIR17HGQ75NE6 70 aa9.15□□□□□ -0.95
SCG2-201ENST00000305409 LY6G5BQ8NDX9 201 aa9.15□□□□□ -0.95
SCG2-201ENST00000305409 P2RX4Q99571 388 aa9.15□□□□□ -0.95
SCG2-201ENST00000305409 SSX3Q99909 188 aa9.15□□□□□ -0.95
SCG2-201ENST00000305409 SMIM7Q9BQ49 75 aa9.15□□□□□ -0.95
SCG2-201ENST00000305409 DOK5Q9P104 306 aa9.15□□□□□ -0.95
SCG2-201ENST00000305409 METTL1Q9UBP6 276 aaKnown RBP9.15□□□□□ -0.95
SCG2-201ENST00000305409 C11orf94C9JXX5 98 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 MPDU1O75352 247 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 LINC00869P0C866 280 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 PSG5Q15238 335 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 SSX2Q16385 188 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 FAM78BQ5VT40 261 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 FAM71F2Q6NXP2 309 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 VSTM2AQ8TAG5 236 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 PCGF1Q9BSM1 259 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 DERL1Q9BUN8 251 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 DOPEY1Q5JWR5 2465 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 SEC14L6B5MCN3 397 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 CD69Q07108 199 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 PLGLAQ15195 96 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 ADIRFQ15847 76 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 SPNS3Q6ZMD2 512 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 C8orf46Q8TAG6 207 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 NPIPB3Q92617 1050 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 MISP3Q96FF7 219 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 PARLQ9H300 379 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 POLQO75417 2590 aa9.14□□□□□ -0.95
SCG2-201ENST00000305409 LRRK2Q5S007 2527 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 MFAP2P55001 183 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 ZNF90Q03938 601 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 PRSS8Q16651 343 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 CLEC12BQ2HXU8 276 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 BSXQ3C1V8 233 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 SLC16A13Q7RTY0 426 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 BEND2Q8NDZ0 799 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 BPESC1Q9GZL8 116 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 SLC45A2Q9UMX9 530 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 SIGLEC9Q9Y336 463 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 PGPEP1LA6NFU8 196 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 LGALS7P47929 136 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 RAB31Q13636 194 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 TMEM144Q7Z5S9 345 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 DYNAPQ8N1N2 210 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 C15orf54Q8N8G6 183 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 FAM103A1Q9BTL3 118 aaKnown RBP9.13□□□□□ -0.95
SCG2-201ENST00000305409 GSX1Q9H4S2 264 aaPredicted RBP9.13□□□□□ -0.95
SCG2-201ENST00000305409 SDF2L1Q9HCN8 221 aa9.13□□□□□ -0.95
SCG2-201ENST00000305409 TGIF2-C20orf24A0A0A6YYL0 155 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 IGLC7A0M8Q6 106 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 LY6LH3BQJ8 138 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 HNF1AP20823 631 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 HTR1DP28221 377 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 RPL29P47914 159 aaKnown RBP9.12□□□□□ -0.95
SCG2-201ENST00000305409 PRR20EP86478 221 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 PRR20CP86479 221 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 PRR20DP86480 221 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 PRR20BP86481 221 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 PRR20AP86496 221 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 HES1Q14469 280 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 MMDQ15546 238 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 MORN5Q5VZ52 161 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 NECAP1Q8NC96 275 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 YTHDF2Q9Y5A9 579 aaKnown RBP9.12□□□□□ -0.95
SCG2-201ENST00000305409 TRAV5A0A0B4J249 113 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 A0A1W2PN81 502 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 A6NNC1 897 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 NDUFB4O95168 129 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 CXCL1P09341 107 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 OR10J4P0C629 311 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 STAG3L2P0CL84 134 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 STAG3L3P0CL85 134 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 CHRNA7P36544 502 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 RPL27AP46776 148 aaKnown RBP9.12□□□□□ -0.95
SCG2-201ENST00000305409 HABP2Q14520 560 aaPredicted RBP9.12□□□□□ -0.95
SCG2-201ENST00000305409 RNF212Q495C1 297 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 TPTE2P1Q5T6R2 138 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 VMO1Q7Z5L0 202 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 PPP1R27Q86WC6 154 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 TNFRSF14Q92956 283 aa9.12□□□□□ -0.95
SCG2-201ENST00000305409 MOSP00540 346 aa9.11□□□□□ -0.95
SCG2-201ENST00000305409 MT-ND4LP03901 98 aa9.11□□□□□ -0.95
SCG2-201ENST00000305409 RAB5AP20339 215 aa9.11□□□□□ -0.95
SCG2-201ENST00000305409 AGAP20933 346 aa9.11□□□□□ -0.95
SCG2-201ENST00000305409 RND2P52198 227 aa9.11□□□□□ -0.95
SCG2-201ENST00000305409 OR4A5Q8NH83 315 aa9.11□□□□□ -0.95
SCG2-201ENST00000305409 Q8WTZ3 238 aa9.11□□□□□ -0.95
SCG2-201ENST00000305409 SLC35E1Q96K37 410 aa9.11□□□□□ -0.95
SCG2-201ENST00000305409 UHRF2Q96PU4 802 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms