RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 PDZD11Q5EBL8 140 aa11.55□□□□□ -0.56
RAB40A-201ENST00000304236 FAM78BQ5VT40 261 aa11.55□□□□□ -0.56
RAB40A-201ENST00000304236 PNKDQ8N490 385 aa11.55□□□□□ -0.56
RAB40A-201ENST00000304236 C8orf31Q8N9H6 132 aa11.55□□□□□ -0.56
RAB40A-201ENST00000304236 C11orf52Q96A22 123 aa11.55□□□□□ -0.56
RAB40A-201ENST00000304236 SFRP2Q96HF1 295 aa11.55□□□□□ -0.56
RAB40A-201ENST00000304236 TMEM167BQ9NRX6 74 aa11.55□□□□□ -0.56
RAB40A-201ENST00000304236 FAM90A27PA6NNH2 459 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 SRRM4A7MD48 611 aaKnown RBP11.54□□□□□ -0.56
RAB40A-201ENST00000304236 LINC00869P0C866 280 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 BSPH1Q075Z2 132 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 TMEM177Q53S58 311 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 OR4A5Q8NH83 315 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 PACRGQ96M98 296 aaPredicted RBP11.54□□□□□ -0.56
RAB40A-201ENST00000304236 HIST1H2BLQ99880 126 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 SAP30LQ9HAJ7 183 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 SEPSECSQ9HD40 501 aaKnown RBP11.54□□□□□ -0.56
RAB40A-201ENST00000304236 DCAF16Q9NXF7 216 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 FUT9Q9Y231 359 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 XKRY2A2RUG3 117 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 INS-IGF2F8WCM5 200 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 TMEM178BH3BS89 294 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 IGKV1-16P04430 117 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 SAA1P0DJI8 122 aaPredicted RBP11.54□□□□□ -0.56
RAB40A-201ENST00000304236 HIST1H1BP16401 226 aaKnown RBP11.54□□□□□ -0.56
RAB40A-201ENST00000304236 PDLIM4P50479 330 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 KRTAP10-9P60411 292 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 LINC00311Q8N616 119 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 OR5AN1Q8NGI8 311 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 RNASEH2CQ8TDP1 164 aaKnown RBP11.54□□□□□ -0.56
RAB40A-201ENST00000304236 DERL1Q9BUN8 251 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 NGBQ9NPG2 151 aa11.54□□□□□ -0.56
RAB40A-201ENST00000304236 YTHDF2Q9Y5A9 579 aaKnown RBP11.54□□□□□ -0.56
RAB40A-201ENST00000304236 TRAV9-1A0A075B6T8 112 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 SCO2A0A1W2PP80 73 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 C9JCJ5 164 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 DVL1O14640 695 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 NDUFB3O43676 98 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 THBDP07204 575 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 MYOD1P15172 320 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 GPX4P36969 197 aaPredicted RBP11.53□□□□□ -0.56
RAB40A-201ENST00000304236 ERHP84090 104 aaKnown RBP11.53□□□□□ -0.56
RAB40A-201ENST00000304236 LRRC10Q5BKY1 277 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 SPATA31B1PQ5VZV4 182 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 OR4P4Q8NGL7 312 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 VSTM2AQ8TAG5 236 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 ZNF596Q8TC21 504 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 CACNG8Q8WXS5 425 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 TMEM186Q96B77 213 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 NABP2Q9BQ15 211 aa11.53□□□□□ -0.56
RAB40A-201ENST00000304236 MRPL20Q9BYC9 149 aaKnown RBP11.53□□□□□ -0.56
RAB40A-201ENST00000304236 TECRQ9NZ01 308 aaKnown RBP11.53□□□□□ -0.56
RAB40A-201ENST00000304236 A0A0U1RQK1 487 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 A0A1W2PN81 502 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 ZNF320A2RRD8 509 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 H0YJW9 148 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 RNASE2P10153 161 aaKnown RBP11.52□□□□□ -0.56
RAB40A-201ENST00000304236 USF1P22415 310 aaPredicted RBP11.52□□□□□ -0.56
RAB40A-201ENST00000304236 IL3RAP26951 378 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 TAS2R45P59539 299 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 SSX2Q16385 188 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 CLEC12BQ2HXU8 276 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 TMEM200BQ69YZ2 307 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 OR10G8Q8NGN5 311 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 FLYWCH2Q96CP2 140 aaKnown RBP11.52□□□□□ -0.56
RAB40A-201ENST00000304236 HARBI1Q96MB7 349 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 COMMD5Q9GZQ3 224 aa11.52□□□□□ -0.56
RAB40A-201ENST00000304236 FBN2P35556 2912 aa11.52□□□□□ -0.57
RAB40A-201ENST00000304236 TNFRSF13BO14836 293 aaPredicted RBP11.52□□□□□ -0.57
RAB40A-201ENST00000304236 RPL8P62917 257 aaKnown RBP11.52□□□□□ -0.57
RAB40A-201ENST00000304236 CD69Q07108 199 aa11.52□□□□□ -0.57
RAB40A-201ENST00000304236 PQLC2Q6ZP29 291 aa11.52□□□□□ -0.57
RAB40A-201ENST00000304236 PDPNQ86YL7 162 aa11.52□□□□□ -0.57
RAB40A-201ENST00000304236 DMRTC2Q8IXT2 367 aaPredicted RBP11.52□□□□□ -0.57
RAB40A-201ENST00000304236 OR5R1Q8NH85 324 aa11.52□□□□□ -0.57
RAB40A-201ENST00000304236 OCC1Q8TAD7 63 aa11.52□□□□□ -0.57
RAB40A-201ENST00000304236 RNF2Q99496 336 aa11.52□□□□□ -0.57
RAB40A-201ENST00000304236 NDUFA4L2Q9NRX3 87 aa11.52□□□□□ -0.57
RAB40A-201ENST00000304236 TMEM106BQ9NUM4 274 aa11.52□□□□□ -0.57
RAB40A-201ENST00000304236 GAMTQ14353 236 aa11.51□□□□□ -0.57
RAB40A-201ENST00000304236 TEX38Q6PEX7 206 aa11.51□□□□□ -0.57
RAB40A-201ENST00000304236 MIR17HGQ75NE6 70 aa11.51□□□□□ -0.57
RAB40A-201ENST00000304236 ZNF114Q8NC26 417 aa11.51□□□□□ -0.57
RAB40A-201ENST00000304236 OR4C13Q8NGP0 309 aa11.51□□□□□ -0.57
RAB40A-201ENST00000304236 SGMS2Q8NHU3 365 aa11.51□□□□□ -0.57
RAB40A-201ENST00000304236 TMEM167AQ8TBQ9 72 aa11.51□□□□□ -0.57
RAB40A-201ENST00000304236 TMEM37Q8WXS4 190 aa11.51□□□□□ -0.57
RAB40A-201ENST00000304236 TRBV20OR9-2A0A075B6H5 130 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 FOXH1O75593 365 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 OR5G3P0C626 314 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 CCL3L1P16619 93 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 OR10J1P30954 320 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 RPL15P61313 204 aaKnown RBP11.5□□□□□ -0.57
RAB40A-201ENST00000304236 OR10X1Q8NGY0 326 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 MRPL32Q9BYC8 188 aaKnown RBP11.5□□□□□ -0.57
RAB40A-201ENST00000304236 AURKAIP1Q9NWT8 199 aaPredicted RBP11.5□□□□□ -0.57
RAB40A-201ENST00000304236 KAAG1Q9UBP8 84 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 TRAPPC1Q9Y5R8 145 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 PDZD2O15018 2839 aa11.5□□□□□ -0.57
RAB40A-201ENST00000304236 TRAV20A0A0B4J274 112 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms