RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 PRRT1Q99946 306 aa8.43□□□□□ -1.06
CLCC1-201ENST00000302500 SRRQ9GZT4 340 aa8.43□□□□□ -1.06
CLCC1-201ENST00000302500 WFDC10AQ9H1F0 79 aa8.43□□□□□ -1.06
CLCC1-201ENST00000302500 EDA2RQ9HAV5 297 aa8.43□□□□□ -1.06
CLCC1-201ENST00000302500 C21orf62Q9NYP8 219 aa8.43□□□□□ -1.06
CLCC1-201ENST00000302500 TECRQ9NZ01 308 aaKnown RBP8.43□□□□□ -1.06
CLCC1-201ENST00000302500 U3KQK5 164 aa8.43□□□□□ -1.06
CLCC1-201ENST00000302500 IGHV3-21A0A0B4J1V1 117 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 RBMY1BA6NDE4 496 aaKnown RBP8.42□□□□□ -1.06
CLCC1-201ENST00000302500 RBMY1EA6NEQ0 496 aaKnown RBP8.42□□□□□ -1.06
CLCC1-201ENST00000302500 OR2T8A6NH00 312 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 LY86O95711 162 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 RBMY1DP0C7P1 496 aaKnown RBP8.42□□□□□ -1.06
CLCC1-201ENST00000302500 TATDN3Q17R31 274 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 SPSB3Q6PJ21 355 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 CCDC71LQ8N9Z2 235 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 UXS1Q8NBZ7 420 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 OR1L6Q8NGR2 347 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 OR52E5Q8NH55 327 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 RBPMSQ93062 196 aaKnown RBP8.42□□□□□ -1.06
CLCC1-201ENST00000302500 CITED4Q96RK1 184 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 PRR13Q9NZ81 148 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 THYN1Q9P016 225 aa8.42□□□□□ -1.06
CLCC1-201ENST00000302500 IGHV3-35A0A0C4DH35 117 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 DISC1C4P0D8 188 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 NDUFA4O00483 81 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 MT-CO2P00403 227 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 S100GP29377 79 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 BTCP35070 178 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 SPINK9Q5DT21 86 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 FAM90A2PQ658T7 463 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 SLC25A24Q6NUK1 477 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 FAM219AQ8IW50 185 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 OR4A16Q8NH70 328 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 DEDD2Q8WXF8 326 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 IL22RA2Q969J5 263 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 GPR146Q96CH1 333 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 TXN2Q99757 166 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 ZFAND3Q9H8U3 227 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 MRPL27Q9P0M9 148 aaKnown RBP8.41□□□□□ -1.06
CLCC1-201ENST00000302500 COPZ2Q9P299 210 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 SELENOKQ9Y6D0 94 aa8.41□□□□□ -1.06
CLCC1-201ENST00000302500 K7EMT4 169 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 PITX3O75364 302 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 BAK1Q16611 211 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 HAGHQ16775 308 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 LINC01559Q495D7 138 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 FAM106AQ4KMX7 169 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 PLET1Q6UQ28 207 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 BTNL8Q6UX41 500 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 SLC35G3Q8N808 338 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 LRTM2Q8N967 370 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 MARC2Q969Z3 335 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 HINT2Q9BX68 163 aa8.4□□□□□ -1.06
CLCC1-201ENST00000302500 DAZ1Q9NQZ3 744 aaKnown RBP8.4□□□□□ -1.06
CLCC1-201ENST00000302500 C15orf62A8K5M9 175 aa8.39□□□□□ -1.07
CLCC1-201ENST00000302500 SCAF4O95104 1147 aaKnown RBP8.39□□□□□ -1.07
CLCC1-201ENST00000302500 NXPH3O95157 252 aa8.39□□□□□ -1.07
CLCC1-201ENST00000302500 IGKV1-17P01599 117 aa8.39□□□□□ -1.07
CLCC1-201ENST00000302500 IGHV3-48P01763 117 aa8.39□□□□□ -1.07
CLCC1-201ENST00000302500 AKR1C2P52895 323 aa8.39□□□□□ -1.07
CLCC1-201ENST00000302500 MLANAQ16655 118 aa8.39□□□□□ -1.07
CLCC1-201ENST00000302500 RCHY1Q96PM5 261 aa8.39□□□□□ -1.07
CLCC1-201ENST00000302500 NEURL2Q9BR09 285 aa8.39□□□□□ -1.07
CLCC1-201ENST00000302500 PLEKHA3Q9HB20 300 aa8.39□□□□□ -1.07
CLCC1-201ENST00000302500 ALMS1Q8TCU4 4167 aa8.39□□□□□ -1.07
CLCC1-201ENST00000302500 TRAV25A0A0B4J276 109 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 A0A0B4J2A0 478 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 A0A1B0GU03 582 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 TSPAN4O14817 238 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 SPCS3P61009 180 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 TRIM16LQ309B1 348 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 ANKRD55Q3KP44 614 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 ODF3L2Q3SX64 289 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 TMEM268Q5VZI3 342 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 ZNF57Q68EA5 555 aaPredicted RBP8.38□□□□□ -1.07
CLCC1-201ENST00000302500 LYZL2Q7Z4W2 148 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 LILRB2Q8N423 598 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 DEFB125Q8N687 156 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 HIPK2Q9H2X6 1198 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 HSPB7Q9UBY9 170 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 CACNG5Q9UF02 275 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 SHPKQ9UHJ6 478 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 C14orf166Q9Y224 244 aaKnown RBP8.38□□□□□ -1.07
CLCC1-201ENST00000302500 UFC1Q9Y3C8 167 aa8.38□□□□□ -1.07
CLCC1-201ENST00000302500 IGHV3OR16-8A0A075B7F1 116 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 ZNF320A2RRD8 509 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 CHEK1O14757 476 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 NOL3O60936 208 aaKnown RBP8.37□□□□□ -1.07
CLCC1-201ENST00000302500 TMEM50AO95807 157 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 MFAP4P55083 255 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 CD81P60033 236 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 C2orf83Q53S99 150 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 MISP3Q96FF7 219 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 FAM110AQ9BQ89 295 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 VSIRQ9H7M9 311 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.37□□□□□ -1.07
CLCC1-201ENST00000302500 SMPXQ9UHP9 88 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 SCP2D1Q9UJQ7 156 aa8.37□□□□□ -1.07
CLCC1-201ENST00000302500 IGHV7-4-1A0A0J9YVY3 117 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms