RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 NPIPB3Q92617 1050 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 RAB1CQ92928 201 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 NEIL1Q96FI4 390 aaPredicted RBP11.74□□□□□ -0.53
SMG8-201ENST00000300917 TIMD4Q96H15 378 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 FNDC4Q9H6D8 234 aaPredicted RBP11.74□□□□□ -0.53
SMG8-201ENST00000300917 FKBP11Q9NYL4 201 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 ZNF257Q9Y2Q1 563 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 IGHV1-3A0A0C4DH29 117 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 A0A0U1RQK1 487 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 FCN1O00602 326 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 OR7C2O60412 319 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 MPDU1O75352 247 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 CHRNA7P36544 502 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 PRRX1P54821 245 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 UHRF2Q96PU4 802 aa11.74□□□□□ -0.53
SMG8-201ENST00000300917 GSX1Q9H4S2 264 aaPredicted RBP11.74□□□□□ -0.53
SMG8-201ENST00000300917 TRBV23-1A0A0A0MS06 115 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 TRAV5A0A0B4J249 113 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 BUB1B-PAK6H3BSN5 160 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 IL3RAP26951 378 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 ZNF90Q03938 601 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 GGACTQ9BVM4 153 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 ELOVL1Q9BW60 279 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 PRORYQ9H606 182 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 METTL1Q9UBP6 276 aaKnown RBP11.73□□□□□ -0.53
SMG8-201ENST00000300917 SCO2A0A1W2PP80 73 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 HES1Q14469 280 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 TMEM167AQ8TBQ9 72 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 P2RX4Q99571 388 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 FAM103A1Q9BTL3 118 aaKnown RBP11.73□□□□□ -0.53
SMG8-201ENST00000300917 MANBALQ9NQG1 85 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 YTHDF2Q9Y5A9 579 aaKnown RBP11.73□□□□□ -0.53
SMG8-201ENST00000300917 MOSP00540 346 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 RPL23P62829 140 aaKnown RBP11.73□□□□□ -0.53
SMG8-201ENST00000300917 PSG5Q15238 335 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 BSXQ3C1V8 233 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 SLC16A13Q7RTY0 426 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 C16orf82Q7Z2V1 217 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 BIN3Q9NQY0 253 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 POLQO75417 2590 aa11.73□□□□□ -0.53
SMG8-201ENST00000300917 IGLV1-47P01700 117 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 LINC00869P0C866 280 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 PRB4P10163 310 aaPredicted RBP11.72□□□□□ -0.53
SMG8-201ENST00000300917 MORN5Q5VZ52 161 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 LINC00311Q8N616 119 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 SEC14L6B5MCN3 397 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 TIMM23O14925 209 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 LCN2P80188 198 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 CD69Q07108 199 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 ZNF114Q8NC26 417 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 VSTM2AQ8TAG5 236 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 SLC35E1Q96K37 410 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 NAT8Q9UHE5 227 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 EPG5Q9HCE0 2579 aa11.72□□□□□ -0.53
SMG8-201ENST00000300917 LY86O95711 162 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 LIPFP07098 398 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 STAG3L2P0CL84 134 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 STAG3L3P0CL85 134 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 G0S2P27469 103 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 GCHFRP30047 84 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 RND2P52198 227 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 RHOBP62745 196 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 SSX2Q16385 188 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 FBLN7Q53RD9 439 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 TUBA4BQ9H853 241 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 S4R3C0 116 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 C2orf83Q53S99 150 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 TMEM144Q7Z5S9 345 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 SSBP3Q9BWW4 388 aaPredicted RBP11.71□□□□□ -0.53
SMG8-201ENST00000300917 MIOXQ9UGB7 285 aa11.71□□□□□ -0.53
SMG8-201ENST00000300917 KLF2Q9Y5W3 355 aaPredicted RBP11.71□□□□□ -0.53
SMG8-201ENST00000300917 TRGC2P03986 189 aa11.71□□□□□ -0.54
SMG8-201ENST00000300917 MC5RP33032 325 aa11.71□□□□□ -0.54
SMG8-201ENST00000300917 FABP9Q0Z7S8 132 aa11.71□□□□□ -0.54
SMG8-201ENST00000300917 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.54
SMG8-201ENST00000300917 PCGF1Q9BSM1 259 aa11.71□□□□□ -0.54
SMG8-201ENST00000300917 SLC45A2Q9UMX9 530 aa11.71□□□□□ -0.54
SMG8-201ENST00000300917 CSMD2Q7Z408 3487 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 LOC105371242A0A075B767 164 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 CLDN34H7C241 214 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 CXorf1O96002 111 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 MMDQ15546 238 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 ASPHD1Q5U4P2 390 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 GPR6P46095 362 aaPredicted RBP11.7□□□□□ -0.54
SMG8-201ENST00000300917 RPL27AP46776 148 aaKnown RBP11.7□□□□□ -0.54
SMG8-201ENST00000300917 RPL29P47914 159 aaKnown RBP11.7□□□□□ -0.54
SMG8-201ENST00000300917 PRR20EP86478 221 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 PRR20CP86479 221 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 PRR20DP86480 221 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 PRR20BP86481 221 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 PRR20AP86496 221 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 CYP2G1PQ6ZSU1 146 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 ITLN2Q8WWU7 325 aaPredicted RBP11.7□□□□□ -0.54
SMG8-201ENST00000300917 LRRK2Q5S007 2527 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 ZNF462Q96JM2 2506 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 CELSR2Q9HCU4 2923 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 A0A087X0M5 115 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 A0A1B0GX30 115 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 CNIH1O95406 144 aa11.7□□□□□ -0.54
SMG8-201ENST00000300917 OR5G3P0C626 314 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms