RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 ENY2Q9NPA8 101 aa9.05□□□□□ -0.96
SNX20-201ENST00000300590 ISLRO14498 428 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 PROP1O75360 226 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 IGHV3-48P01763 117 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 AREGP15514 252 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 PPOXP50336 477 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 MDP1Q86V88 176 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 TMEM186Q96B77 213 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 HES7Q9BYE0 225 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 SAP30LQ9HAJ7 183 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 TMEM140Q9NV12 185 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 M0R296 226 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 KLF7O75840 302 aaPredicted RBP9.04□□□□□ -0.96
SNX20-201ENST00000300590 FOXE3Q13461 319 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 TCF24Q7RTU0 167 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 CADP27708 2225 aa9.04□□□□□ -0.96
SNX20-201ENST00000300590 SMIM27A0A1W2PRY6 76 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 FBLL1A6NHQ2 334 aaKnown RBP9.03□□□□□ -0.96
SNX20-201ENST00000300590 HIGD1CA8MV81 97 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 IGLV2-8P01709 118 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 PRB4P10163 310 aaPredicted RBP9.03□□□□□ -0.96
SNX20-201ENST00000300590 ARR3P36575 388 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 VDAC2P45880 294 aaPredicted RBP9.03□□□□□ -0.96
SNX20-201ENST00000300590 TBR1Q16650 682 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 GTSF1LQ9H1H1 148 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 RP1L1Q8IWN7 2480 aaPredicted RBP9.03□□□□□ -0.96
SNX20-201ENST00000300590 DUTP33316 252 aaKnown RBP9.03□□□□□ -0.96
SNX20-201ENST00000300590 COX19Q49B96 90 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 LYSMD4Q5XG99 296 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 VWA1Q6PCB0 445 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 SNRNP40Q96DI7 357 aaKnown RBP9.03□□□□□ -0.96
SNX20-201ENST00000300590 DUSP13Q9UII6 198 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 TMEM238LA0A1B0GVL6 79 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 LEPROTL1O95214 131 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 PLAUP00749 431 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 REG1AP05451 166 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 RHOGP84095 191 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 EIF4EBP1Q13541 118 aaPredicted RBP9.03□□□□□ -0.96
SNX20-201ENST00000300590 S1PR3Q99500 378 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 TMEM167BQ9NRX6 74 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 MRPL27Q9P0M9 148 aaKnown RBP9.03□□□□□ -0.96
SNX20-201ENST00000300590 LSM4Q9Y4Z0 139 aaKnown RBP9.03□□□□□ -0.96
SNX20-201ENST00000300590 LY96Q9Y6Y9 160 aa9.03□□□□□ -0.96
SNX20-201ENST00000300590 NBEAP1P0C6P0 100 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 ZNF146Q15072 292 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 MORN5Q5VZ52 161 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 Q8IYB0 196 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 DEFB125Q8N687 156 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 NANOS1Q8WY41 292 aaKnown RBP9.02□□□□□ -0.97
SNX20-201ENST00000300590 ZNF503Q96F45 646 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 SPINT2O43291 252 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 PYYP10082 97 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 LTBRP36941 435 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 ERVK11-1P61568 191 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 UBE2L3P68036 154 aaKnown RBP9.02□□□□□ -0.97
SNX20-201ENST00000300590 FER1L6-AS1Q8NA97 138 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 ZNF784Q8NCA9 323 aaPredicted RBP9.02□□□□□ -0.97
SNX20-201ENST00000300590 OR9G1Q8NH87 305 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 RAB37Q96AX2 223 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 LOXL2Q9Y4K0 774 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 DMDP11532 3685 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 PRSS46E5RG02 174 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 UTF1Q5T230 341 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 C12orf54Q6X4T0 127 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 OR1B1Q8NGR6 318 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 SLC25A40Q8TBP6 338 aa9.02□□□□□ -0.97
SNX20-201ENST00000300590 LOC102723996A0A087X1L8 192 aa9.01□□□□□ -0.97
SNX20-201ENST00000300590 C7orf71A4D174 169 aa9.01□□□□□ -0.97
SNX20-201ENST00000300590 SYS1-DBNDD2H3BUS1 97 aa9.01□□□□□ -0.97
SNX20-201ENST00000300590 CYB561P49447 251 aa9.01□□□□□ -0.97
SNX20-201ENST00000300590 GNG5P63218 68 aa9.01□□□□□ -0.97
SNX20-201ENST00000300590 PAX2Q02962 417 aa9.01□□□□□ -0.97
SNX20-201ENST00000300590 SLC35E4Q6ICL7 350 aa9.01□□□□□ -0.97
SNX20-201ENST00000300590 FOLR3P41439 243 aa9.01□□□□□ -0.97
SNX20-201ENST00000300590 TMEM116Q8NCL8 245 aa9.01□□□□□ -0.97
SNX20-201ENST00000300590 AMMECR1Q9Y4X0 333 aaPredicted RBP9.01□□□□□ -0.97
SNX20-201ENST00000300590 HILPDAQ9Y5L2 63 aa9.01□□□□□ -0.97
SNX20-201ENST00000300590 ROS1P08922 2347 aa9.01□□□□□ -0.97
SNX20-201ENST00000300590 IGKV1OR2-108A0A075B7D4 117 aa9□□□□□ -0.97
SNX20-201ENST00000300590 FAM231BA6NCW3 169 aa9□□□□□ -0.97
SNX20-201ENST00000300590 MAGEA5P43359 124 aa9□□□□□ -0.97
SNX20-201ENST00000300590 PLP1P60201 277 aa9□□□□□ -0.97
SNX20-201ENST00000300590 Q0VFX4 171 aa9□□□□□ -0.97
SNX20-201ENST00000300590 LINC00696Q6ZRV3 163 aa9□□□□□ -0.97
SNX20-201ENST00000300590 GTF2H5Q6ZYL4 71 aa9□□□□□ -0.97
SNX20-201ENST00000300590 URB1-AS1Q96HZ7 61 aa9□□□□□ -0.97
SNX20-201ENST00000300590 PEF1Q9UBV8 284 aaKnown RBP9□□□□□ -0.97
SNX20-201ENST00000300590 PCNX2A6NKB5 2137 aa9□□□□□ -0.97
SNX20-201ENST00000300590 WDFY4Q6ZS81 3184 aa9□□□□□ -0.97
SNX20-201ENST00000300590 TNRC6AQ8NDV7 1962 aaKnown RBP9□□□□□ -0.97
SNX20-201ENST00000300590 VWC2LB2RUY7 222 aa9□□□□□ -0.97
SNX20-201ENST00000300590 PGLYRP4Q96LB8 373 aa9□□□□□ -0.97
SNX20-201ENST00000300590 OR2V2Q96R30 315 aa9□□□□□ -0.97
SNX20-201ENST00000300590 TMEM191AQ9H0A3 160 aa9□□□□□ -0.97
SNX20-201ENST00000300590 ABI3Q9P2A4 366 aa9□□□□□ -0.97
SNX20-201ENST00000300590 A0A1B0GV72 72 aa9□□□□□ -0.97
SNX20-201ENST00000300590 H3BTX0 84 aa9□□□□□ -0.97
SNX20-201ENST00000300590 SS18L1O75177 396 aaPredicted RBP9□□□□□ -0.97
SNX20-201ENST00000300590 SPEM1Q8N4L4 309 aa9□□□□□ -0.97
SNX20-201ENST00000300590 TMEM251Q8N6I4 163 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms