RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 IGHV4-38-2P0DP08 117 aa12.5□□□□□ -0.41
HERPUD1-201ENST00000300302 M6PRP20645 277 aa12.5□□□□□ -0.41
HERPUD1-201ENST00000300302 PVRIGQ6DKI7 326 aa12.5□□□□□ -0.41
HERPUD1-201ENST00000300302 BPIFCQ8NFQ6 507 aa12.5□□□□□ -0.41
HERPUD1-201ENST00000300302 RCC1LQ96I51 464 aaKnown RBP12.5□□□□□ -0.41
HERPUD1-201ENST00000300302 MEGF9Q9H1U4 602 aa12.5□□□□□ -0.41
HERPUD1-201ENST00000300302 TREM1Q9NP99 234 aa12.5□□□□□ -0.41
HERPUD1-201ENST00000300302 F11RQ9Y624 299 aaKnown RBP12.5□□□□□ -0.41
HERPUD1-201ENST00000300302 A0A1B0GV50 99 aa12.49□□□□□ -0.41
HERPUD1-201ENST00000300302 CYB5BO43169 146 aa12.49□□□□□ -0.41
HERPUD1-201ENST00000300302 SPSB3Q6PJ21 355 aa12.49□□□□□ -0.41
HERPUD1-201ENST00000300302 MBD3L1Q8WWY6 194 aa12.49□□□□□ -0.41
HERPUD1-201ENST00000300302 RASL11BQ9BPW5 248 aa12.49□□□□□ -0.41
HERPUD1-201ENST00000300302 ACTR3CQ9C0K3 210 aaPredicted RBP12.49□□□□□ -0.41
HERPUD1-201ENST00000300302 SLC39A9Q9NUM3 307 aa12.49□□□□□ -0.41
HERPUD1-201ENST00000300302 PXMP4Q9Y6I8 212 aa12.49□□□□□ -0.41
HERPUD1-201ENST00000300302 CENPEQ02224 2701 aa12.49□□□□□ -0.41
HERPUD1-201ENST00000300302 A0A0U1RQK1 487 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 TGFAP01135 160 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 CX3CL1P78423 397 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 PEA15Q15121 130 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 Q8N9W7 124 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 OR1L6Q8NGR2 347 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 ARPC1AQ92747 370 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 MISP3Q96FF7 219 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 Q96MF0 132 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 EIF5A2Q9GZV4 153 aaKnown RBP12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 DEFA4P12838 97 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 RPL29P47914 159 aaKnown RBP12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 ZNF726P1Q15940 193 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 MLANAQ16655 118 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 GUK1Q16774 197 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 C22orf15Q8WYQ4 148 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 PTPN13Q12923 2485 aa12.48□□□□□ -0.41
HERPUD1-201ENST00000300302 CTXND1A0A1B0GTU2 59 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 TMEM218A2RU14 115 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 MAP1LC3B2A6NCE7 125 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 HLA-DRB1P01911 266 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 CD5P06127 495 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 FBP1P09467 338 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 BPIFB3P59826 476 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 B2MP61769 119 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 MIC13Q5XKP0 118 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 LCN15Q6UWW0 184 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 MAPK1IP1LQ8NDC0 245 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 ACY3Q96HD9 319 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 MAP1LC3BQ9GZQ8 125 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 FNDC4Q9H6D8 234 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 TMEM231Q9H6L2 316 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 GCN1Q92616 2671 aaKnown RBP12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 PLXNB1O43157 2135 aa12.47□□□□□ -0.41
HERPUD1-201ENST00000300302 CTRB1P17538 263 aa12.46□□□□□ -0.41
HERPUD1-201ENST00000300302 CCL20P78556 96 aa12.46□□□□□ -0.41
HERPUD1-201ENST00000300302 TMEM249Q2WGJ8 235 aa12.46□□□□□ -0.41
HERPUD1-201ENST00000300302 CTRB2Q6GPI1 263 aa12.46□□□□□ -0.41
HERPUD1-201ENST00000300302 FAM122CQ6P4D5 195 aa12.46□□□□□ -0.41
HERPUD1-201ENST00000300302 STPG3Q8N7X2 389 aa12.46□□□□□ -0.41
HERPUD1-201ENST00000300302 OR2T6Q8NHC8 308 aa12.46□□□□□ -0.41
HERPUD1-201ENST00000300302 WNT10AQ9GZT5 417 aa12.46□□□□□ -0.41
HERPUD1-201ENST00000300302 A0A1W2PPV4 95 aa12.46□□□□□ -0.42
HERPUD1-201ENST00000300302 SCO1O75880 301 aa12.46□□□□□ -0.42
HERPUD1-201ENST00000300302 AVPP01185 164 aa12.46□□□□□ -0.42
HERPUD1-201ENST00000300302 IGHV4-31P0DP07 118 aa12.46□□□□□ -0.42
HERPUD1-201ENST00000300302 CDC34P49427 236 aaPredicted RBP12.46□□□□□ -0.42
HERPUD1-201ENST00000300302 MFAP2P55001 183 aa12.46□□□□□ -0.42
HERPUD1-201ENST00000300302 KLF17Q5JT82 389 aaPredicted RBP12.46□□□□□ -0.42
HERPUD1-201ENST00000300302 FAM103A1Q9BTL3 118 aaKnown RBP12.46□□□□□ -0.42
HERPUD1-201ENST00000300302 SMDT1Q9H4I9 107 aa12.46□□□□□ -0.42
HERPUD1-201ENST00000300302 SLC25A22Q9H936 323 aa12.46□□□□□ -0.42
HERPUD1-201ENST00000300302 SLC45A2Q9UMX9 530 aa12.46□□□□□ -0.42
HERPUD1-201ENST00000300302 IGKV1OR2-108A0A075B7D4 117 aa12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 RBFOX3A6NFN3 312 aa12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 OR10J1P30954 320 aa12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 PRR20EP86478 221 aa12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 PRR20CP86479 221 aa12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 PRR20DP86480 221 aa12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 PRR20BP86481 221 aa12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 PRR20AP86496 221 aa12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 SSX7Q7RTT5 188 aa12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 NPIPB3Q92617 1050 aa12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 RBM14Q96PK6 669 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 SSX3Q99909 188 aa12.45□□□□□ -0.42
HERPUD1-201ENST00000300302 POLQO75417 2590 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 IGHV7-81A0A0B4J1V7 117 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 NPIPB5A8MRT5 1133 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 SEC14L6B5MCN3 397 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 YIF1AO95070 293 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 CRYGCP07315 174 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 KRTAP1-3Q8IUG1 177 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 RAB24Q969Q5 203 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 SLC25A33Q9BSK2 321 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 MOB4Q9Y3A3 225 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 NAV3Q8IVL0 2385 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 MT-CO2P00403 227 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 RND2P52198 227 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 FGF8P55075 233 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 C19orf35Q6ZS72 473 aa12.44□□□□□ -0.42
HERPUD1-201ENST00000300302 THAP8Q8NA92 274 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms