RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 NAT8BQ9UHF3 227 aa19.85■□□□□ 0.77
SPTSSA-201ENST00000298130 PAM16Q9Y3D7 125 aa19.85■□□□□ 0.77
SPTSSA-201ENST00000298130 PLAUP00749 431 aa19.84■□□□□ 0.77
SPTSSA-201ENST00000298130 G0S2P27469 103 aa19.84■□□□□ 0.77
SPTSSA-201ENST00000298130 TMEM106BQ9NUM4 274 aa19.84■□□□□ 0.77
SPTSSA-201ENST00000298130 ANKRD11Q6UB99 2663 aaPredicted RBP19.84■□□□□ 0.77
SPTSSA-201ENST00000298130 TACC2O95359 2948 aa19.84■□□□□ 0.77
SPTSSA-201ENST00000298130 SGK494Q96LW2 274 aa19.84■□□□□ 0.77
SPTSSA-201ENST00000298130 APELAP0DMC3 54 aa19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 PYYP10082 97 aa19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 RTL8BQ17RB0 113 aa19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 ZNF788Q6ZQV5 615 aa19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 HARBI1Q96MB7 349 aa19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 IL19Q9UHD0 177 aa19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 RPUSD1Q9UJJ7 312 aaKnown RBP19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 CSMD1Q96PZ7 3565 aa19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 AREGP15514 252 aa19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 SLC25A48Q6ZT89 311 aaKnown RBP19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 FAM222BQ8WU58 562 aa19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 TECRQ9NZ01 308 aaKnown RBP19.83■□□□□ 0.77
SPTSSA-201ENST00000298130 RNASE2P10153 161 aaKnown RBP19.83■□□□□ 0.76
SPTSSA-201ENST00000298130 C1orf194Q5T5A4 169 aa19.83■□□□□ 0.76
SPTSSA-201ENST00000298130 FAM168AQ92567 244 aa19.83■□□□□ 0.76
SPTSSA-201ENST00000298130 GNB4Q9HAV0 340 aa19.83■□□□□ 0.76
SPTSSA-201ENST00000298130 RELNP78509 3460 aa19.82■□□□□ 0.76
SPTSSA-201ENST00000298130 TRAV34A0A0B4J273 112 aa19.82■□□□□ 0.76
SPTSSA-201ENST00000298130 C9JCJ5 164 aa19.82■□□□□ 0.76
SPTSSA-201ENST00000298130 FCN3O75636 299 aa19.82■□□□□ 0.76
SPTSSA-201ENST00000298130 REG1AP05451 166 aa19.82■□□□□ 0.76
SPTSSA-201ENST00000298130 DLX1P56177 255 aa19.82■□□□□ 0.76
SPTSSA-201ENST00000298130 PIP4P1Q86T03 277 aa19.82■□□□□ 0.76
SPTSSA-201ENST00000298130 ZGRF1Q86YA3 2104 aa19.82■□□□□ 0.76
SPTSSA-201ENST00000298130 BEND2Q8NDZ0 799 aa19.82■□□□□ 0.76
SPTSSA-201ENST00000298130 SELENOVP59797 346 aa19.82■□□□□ 0.76
SPTSSA-201ENST00000298130 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.82■□□□□ 0.76
SPTSSA-201ENST00000298130 TCAPO15273 167 aa19.81■□□□□ 0.76
SPTSSA-201ENST00000298130 TPPP2P59282 170 aa19.81■□□□□ 0.76
SPTSSA-201ENST00000298130 SELENOTP62341 195 aa19.81■□□□□ 0.76
SPTSSA-201ENST00000298130 H1FXQ92522 213 aaKnown RBP19.81■□□□□ 0.76
SPTSSA-201ENST00000298130 RCHY1Q96PM5 261 aa19.81■□□□□ 0.76
SPTSSA-201ENST00000298130 CD40P25942 277 aa19.81■□□□□ 0.76
SPTSSA-201ENST00000298130 SSTP61278 116 aa19.81■□□□□ 0.76
SPTSSA-201ENST00000298130 WFDC8Q8IUA0 241 aa19.81■□□□□ 0.76
SPTSSA-201ENST00000298130 C1orf174Q8IYL3 243 aa19.81■□□□□ 0.76
SPTSSA-201ENST00000298130 FAM169BQ8N8A8 192 aa19.81■□□□□ 0.76
SPTSSA-201ENST00000298130 ADTRPQ96IZ2 230 aa19.81■□□□□ 0.76
SPTSSA-201ENST00000298130 IRF2P14316 349 aa19.8■□□□□ 0.76
SPTSSA-201ENST00000298130 TIGITQ495A1 244 aa19.8■□□□□ 0.76
SPTSSA-201ENST00000298130 C19orf35Q6ZS72 473 aa19.8■□□□□ 0.76
SPTSSA-201ENST00000298130 COMMD5Q9GZQ3 224 aa19.8■□□□□ 0.76
SPTSSA-201ENST00000298130 TMEM167BQ9NRX6 74 aa19.8■□□□□ 0.76
SPTSSA-201ENST00000298130 ITGB1BP1O14713 200 aa19.79■□□□□ 0.76
SPTSSA-201ENST00000298130 GATA4P43694 442 aa19.79■□□□□ 0.76
SPTSSA-201ENST00000298130 KRTDAPP60985 99 aa19.79■□□□□ 0.76
SPTSSA-201ENST00000298130 TPTE2P1Q5T6R2 138 aa19.79■□□□□ 0.76
SPTSSA-201ENST00000298130 SLC25A10Q9UBX3 287 aaPredicted RBP19.79■□□□□ 0.76
SPTSSA-201ENST00000298130 PMCHP20382 165 aa19.79■□□□□ 0.76
SPTSSA-201ENST00000298130 UBE2L3P68036 154 aaKnown RBP19.79■□□□□ 0.76
SPTSSA-201ENST00000298130 CORO2AQ92828 525 aa19.79■□□□□ 0.76
SPTSSA-201ENST00000298130 MRPL36Q9P0J6 103 aaKnown RBP19.79■□□□□ 0.76
SPTSSA-201ENST00000298130 IGHV3-72A0A0B4J1Y9 119 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 IGLV2-8P01709 118 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 NUTF2P61970 127 aaKnown RBP19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 POU2AF1Q16633 256 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 C1orf185Q5T7R7 199 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 RUSC1-AS1Q66K80 236 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 OR5AU1Q8NGC0 362 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 SLC25A33Q9BSK2 321 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 IGHV3-21A0A0B4J1V1 117 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 CD69Q07108 199 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 RITA1Q96K30 269 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 FBXL7Q9UJT9 491 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 IBA57Q5T440 356 aaKnown RBP19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 CCL17Q92583 94 aa19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 FNDC4Q9H6D8 234 aaPredicted RBP19.78■□□□□ 0.76
SPTSSA-201ENST00000298130 PRR27Q6MZM9 219 aa19.77■□□□□ 0.76
SPTSSA-201ENST00000298130 NPIPB3Q92617 1050 aa19.77■□□□□ 0.76
SPTSSA-201ENST00000298130 SLC25A2Q9BXI2 301 aa19.77■□□□□ 0.76
SPTSSA-201ENST00000298130 TPSG1Q9NRR2 321 aa19.77■□□□□ 0.76
SPTSSA-201ENST00000298130 ZNF257Q9Y2Q1 563 aa19.77■□□□□ 0.76
SPTSSA-201ENST00000298130 KIR2DL5BA0A0G2JN68 375 aa19.77■□□□□ 0.75
SPTSSA-201ENST00000298130 KIR2DL5BA0A0G2JPC4 375 aa19.77■□□□□ 0.75
SPTSSA-201ENST00000298130 hADV38S2A0JD32 116 aa19.77■□□□□ 0.75
SPTSSA-201ENST00000298130 BATFQ16520 125 aa19.77■□□□□ 0.75
SPTSSA-201ENST00000298130 LYPD2Q6UXB3 125 aa19.77■□□□□ 0.75
SPTSSA-201ENST00000298130 KIR2DL5AQ8N109 375 aa19.77■□□□□ 0.75
SPTSSA-201ENST00000298130 FAM19A2Q8N3H0 131 aa19.77■□□□□ 0.75
SPTSSA-201ENST00000298130 A6NNC1 897 aa19.76■□□□□ 0.75
SPTSSA-201ENST00000298130 OR5G3P0C626 314 aa19.76■□□□□ 0.75
SPTSSA-201ENST00000298130 C8orf88P0DMB2 117 aa19.76■□□□□ 0.75
SPTSSA-201ENST00000298130 PRB4P10163 310 aaPredicted RBP19.76■□□□□ 0.75
SPTSSA-201ENST00000298130 TNFSF4P23510 183 aa19.76■□□□□ 0.75
SPTSSA-201ENST00000298130 WT1-ASQ06250 92 aa19.76■□□□□ 0.75
SPTSSA-201ENST00000298130 C2orf83Q53S99 150 aa19.76■□□□□ 0.75
SPTSSA-201ENST00000298130 SLC35E1Q96K37 410 aa19.76■□□□□ 0.75
SPTSSA-201ENST00000298130 RPL8P62917 257 aaKnown RBP19.76■□□□□ 0.75
SPTSSA-201ENST00000298130 RAB9BQ9NP90 201 aa19.76■□□□□ 0.75
SPTSSA-201ENST00000298130 H0YJW9 148 aa19.75■□□□□ 0.75
SPTSSA-201ENST00000298130 SRIP30626 198 aa19.75■□□□□ 0.75
SPTSSA-201ENST00000298130 CX3CL1P78423 397 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms