RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 OPRK1P41145 380 aa18.14■□□□□ 0.49
PTX3-201ENST00000295927 ZNF562Q6V9R5 426 aa18.14■□□□□ 0.49
PTX3-201ENST00000295927 TMEM144Q7Z5S9 345 aa18.14■□□□□ 0.49
PTX3-201ENST00000295927 BPIFCQ8NFQ6 507 aa18.14■□□□□ 0.49
PTX3-201ENST00000295927 ABHD5Q8WTS1 349 aa18.14■□□□□ 0.49
PTX3-201ENST00000295927 RCC1LQ96I51 464 aaKnown RBP18.14■□□□□ 0.49
PTX3-201ENST00000295927 MEGF9Q9H1U4 602 aa18.14■□□□□ 0.49
PTX3-201ENST00000295927 FNDC4Q9H6D8 234 aaPredicted RBP18.14■□□□□ 0.49
PTX3-201ENST00000295927 IGHV4-31P0DP07 118 aa18.13■□□□□ 0.49
PTX3-201ENST00000295927 CX3CL1P78423 397 aa18.13■□□□□ 0.49
PTX3-201ENST00000295927 RPP25LQ8N5L8 163 aaKnown RBP18.13■□□□□ 0.49
PTX3-201ENST00000295927 COMMD1Q8N668 190 aa18.13■□□□□ 0.49
PTX3-201ENST00000295927 OR1P1Q8NH06 330 aa18.13■□□□□ 0.49
PTX3-201ENST00000295927 SOX21Q9Y651 276 aaPredicted RBP18.13■□□□□ 0.49
PTX3-201ENST00000295927 CCL20P78556 96 aa18.13■□□□□ 0.49
PTX3-201ENST00000295927 SSX7Q7RTT5 188 aa18.13■□□□□ 0.49
PTX3-201ENST00000295927 OR2T6Q8NHC8 308 aa18.13■□□□□ 0.49
PTX3-201ENST00000295927 FAM103A1Q9BTL3 118 aaKnown RBP18.13■□□□□ 0.49
PTX3-201ENST00000295927 TMEM231Q9H6L2 316 aa18.13■□□□□ 0.49
PTX3-201ENST00000295927 F11RQ9Y624 299 aaKnown RBP18.13■□□□□ 0.49
PTX3-201ENST00000295927 J3QLI3 93 aa18.12■□□□□ 0.49
PTX3-201ENST00000295927 RAB31Q13636 194 aa18.12■□□□□ 0.49
PTX3-201ENST00000295927 TMEM249Q2WGJ8 235 aa18.12■□□□□ 0.49
PTX3-201ENST00000295927 MIC13Q5XKP0 118 aa18.12■□□□□ 0.49
PTX3-201ENST00000295927 OR10G4Q8NGN3 311 aa18.12■□□□□ 0.49
PTX3-201ENST00000295927 OR10G9Q8NGN4 311 aa18.12■□□□□ 0.49
PTX3-201ENST00000295927 OR10G7Q8NGN6 311 aa18.12■□□□□ 0.49
PTX3-201ENST00000295927 SLC35E1Q96K37 410 aa18.12■□□□□ 0.49
PTX3-201ENST00000295927 FAM96BQ9Y3D0 163 aa18.12■□□□□ 0.49
PTX3-201ENST00000295927 PXMP4Q9Y6I8 212 aa18.12■□□□□ 0.49
PTX3-201ENST00000295927 CELSR1Q9NYQ6 3014 aa18.12■□□□□ 0.49
PTX3-201ENST00000295927 IGKV1OR2-108A0A075B7D4 117 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 ZP3P21754 424 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 LFNGQ8NES3 379 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 MBD3L1Q8WWY6 194 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 MISP3Q96FF7 219 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 BTBD17A6NE02 478 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 KRBOX1C9JBD0 128 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 SOX15O60248 233 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 HBE1P02100 147 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 M6PRP20645 277 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 NDPQ00604 133 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 ACOT6Q3I5F7 207 aaPredicted RBP18.11■□□□□ 0.49
PTX3-201ENST00000295927 LCN15Q6UWW0 184 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 PIFOQ8TCI5 191 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 ARPC1AQ92747 370 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 ACY3Q96HD9 319 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 NARS2Q96I59 477 aaKnown RBP18.11■□□□□ 0.49
PTX3-201ENST00000295927 FAM210AQ96ND0 272 aa18.11■□□□□ 0.49
PTX3-201ENST00000295927 GCN1Q92616 2671 aaKnown RBP18.11■□□□□ 0.49
PTX3-201ENST00000295927 TRAV1-1A0A0B4J248 108 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 YIF1AO95070 293 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 RASL11BQ9BPW5 248 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 TREM1Q9NP99 234 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 KCNIP2Q9NS61 270 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 DMRT1Q9Y5R6 373 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 IGHV3-48P01763 117 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 CTRB1P17538 263 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 GCSAMLQ5JQS6 135 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 CTRB2Q6GPI1 263 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 SCRT1Q9BWW7 348 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 WNT10AQ9GZT5 417 aa18.1■□□□□ 0.49
PTX3-201ENST00000295927 ABCA1O95477 2261 aa18.09■□□□□ 0.49
PTX3-201ENST00000295927 IGHV7-81A0A0B4J1V7 117 aa18.09■□□□□ 0.49
PTX3-201ENST00000295927 EIF3GO75821 320 aaKnown RBP eCLIP18.09■□□□□ 0.49
PTX3-201ENST00000295927 HLA-DRB1P01911 266 aa18.09■□□□□ 0.49
PTX3-201ENST00000295927 CD5P06127 495 aa18.09■□□□□ 0.49
PTX3-201ENST00000295927 RPL29P47914 159 aaKnown RBP18.09■□□□□ 0.49
PTX3-201ENST00000295927 GUK1Q16774 197 aa18.09■□□□□ 0.49
PTX3-201ENST00000295927 FAM122CQ6P4D5 195 aa18.09■□□□□ 0.49
PTX3-201ENST00000295927 SSX3Q99909 188 aa18.09■□□□□ 0.49
PTX3-201ENST00000295927 SLC39A9Q9NUM3 307 aa18.09■□□□□ 0.49
PTX3-201ENST00000295927 CORTO00230 105 aa18.08■□□□□ 0.49
PTX3-201ENST00000295927 B2MP61769 119 aa18.08■□□□□ 0.49
PTX3-201ENST00000295927 ETFRF1Q6IPR1 90 aa18.08■□□□□ 0.49
PTX3-201ENST00000295927 STPG3Q8N7X2 389 aa18.08■□□□□ 0.49
PTX3-201ENST00000295927 ACTR3CQ9C0K3 210 aaPredicted RBP18.08■□□□□ 0.49
PTX3-201ENST00000295927 SLC25A22Q9H936 323 aa18.08■□□□□ 0.49
PTX3-201ENST00000295927 MRPL36Q9P0J6 103 aaKnown RBP18.08■□□□□ 0.49
PTX3-201ENST00000295927 SLC45A2Q9UMX9 530 aa18.08■□□□□ 0.49
PTX3-201ENST00000295927 MAP1LC3B2A6NCE7 125 aa18.08■□□□□ 0.48
PTX3-201ENST00000295927 CYB5BO43169 146 aa18.08■□□□□ 0.48
PTX3-201ENST00000295927 CRYGCP07315 174 aa18.08■□□□□ 0.48
PTX3-201ENST00000295927 FBP1P09467 338 aa18.08■□□□□ 0.48
PTX3-201ENST00000295927 DEFA4P12838 97 aa18.08■□□□□ 0.48
PTX3-201ENST00000295927 OR10J1P30954 320 aa18.08■□□□□ 0.48
PTX3-201ENST00000295927 FGF8P55075 233 aaPredicted RBP18.08■□□□□ 0.48
PTX3-201ENST00000295927 ASPHD1Q5U4P2 390 aa18.08■□□□□ 0.48
PTX3-201ENST00000295927 NPIPB3Q92617 1050 aa18.08■□□□□ 0.48
PTX3-201ENST00000295927 SLC25A33Q9BSK2 321 aa18.08■□□□□ 0.48
PTX3-201ENST00000295927 MAP1LC3BQ9GZQ8 125 aa18.08■□□□□ 0.48
PTX3-201ENST00000295927 CTXND1A0A1B0GTU2 59 aa18.07■□□□□ 0.48
PTX3-201ENST00000295927 TMEM218A2RU14 115 aa18.07■□□□□ 0.48
PTX3-201ENST00000295927 PRR20EP86478 221 aa18.07■□□□□ 0.48
PTX3-201ENST00000295927 PRR20CP86479 221 aa18.07■□□□□ 0.48
PTX3-201ENST00000295927 PRR20DP86480 221 aa18.07■□□□□ 0.48
PTX3-201ENST00000295927 PRR20BP86481 221 aa18.07■□□□□ 0.48
PTX3-201ENST00000295927 PRR20AP86496 221 aa18.07■□□□□ 0.48
PTX3-201ENST00000295927 TMEM219Q86XT9 240 aa18.07■□□□□ 0.48
PTX3-201ENST00000295927 RBM14Q96PK6 669 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms