RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 GPR6P46095 362 aaPredicted RBP8.38□□□□□ -1.07
COL6A3-201ENST00000295550 TMEM187Q14656 261 aa8.38□□□□□ -1.07
COL6A3-201ENST00000295550 GAGE13Q4V321 117 aa8.38□□□□□ -1.07
COL6A3-201ENST00000295550 FLVCR1-AS1Q8TAF5 88 aa8.38□□□□□ -1.07
COL6A3-201ENST00000295550 ZG16O60844 167 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 MOSP00540 346 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 ODAMA1E959 279 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 GAGE2BQ13066 116 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 GAGE2EQ4V326 116 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 ARTNQ5T4W7 220 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 UNQ5815/PRO19632Q6UWF5 114 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 RNF182Q8N6D2 247 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 ZNF71Q9NQZ8 489 aaPredicted RBP8.37□□□□□ -1.07
COL6A3-201ENST00000295550 TMEM74BQ9NUR3 256 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 GAGE2DQ9UEU5 116 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 IZUMO1RA6ND01 250 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 TGFBR3LH3BV60 316 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 MGST3O14880 152 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 CFAP161Q6P656 301 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 LRTM2Q8N967 370 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 SCO2A0A1W2PP80 73 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 PLNP26678 52 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 ASIPP42127 132 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 OR10J3Q5JRS4 329 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 RIPPLY2Q5TAB7 128 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 IGHV3-48P01763 117 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 FOXC1Q12948 553 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 C1orf210Q8IVY1 113 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 A0A0J9YW62 118 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 A0A1W2PRS3 328 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 UCP3P55916 312 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 GGTLC3B5MD39 225 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 IGLV3-19P01714 112 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 DEFB123Q8N688 67 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 TM2D1Q9BX74 207 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 TTTY12Q9BZ98 90 aa8.37□□□□□ -1.07
COL6A3-201ENST00000295550 TET2Q6N021 2002 aaPredicted RBP8.36□□□□□ -1.07
COL6A3-201ENST00000295550 C9JCJ5 164 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 TIMM23BQ5SRD1 257 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 VKORC1Q9BQB6 163 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 CYSLTR1Q9Y271 337 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 A8MWV9 139 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 RNASE4P34096 147 aaKnown RBP8.36□□□□□ -1.07
COL6A3-201ENST00000295550 SRSF6Q13247 344 aaKnown RBP8.36□□□□□ -1.07
COL6A3-201ENST00000295550 TOMM7Q9P0U1 55 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 TCF19Q9Y242 345 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 COX11Q9Y6N1 276 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 EPOPA6NHQ4 379 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 FBLN5Q9UBX5 448 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 MPV17P39210 176 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 CCL8P80075 99 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 Q6AWC8 147 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 CALYQ9NYX4 217 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 C16orf97H3BN30 126 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 CCL4P13236 92 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 HOXA3O43365 443 aaPredicted RBP8.36□□□□□ -1.07
COL6A3-201ENST00000295550 DCAF10Q5QP82 559 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 TMEM106BQ9NUM4 274 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 C1orf185Q5T7R7 199 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 MUC21A0A0G2JKD1 596 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 MUC21A0A140T8X8 626 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 COX6A1P12074 109 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 SEC11AP67812 179 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 TMEM155Q4W5P6 130 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 MUC21Q5SSG8 566 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 ASPHD2Q6ICH7 369 aa8.36□□□□□ -1.07
COL6A3-201ENST00000295550 GFI1Q99684 422 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 MS4A6AQ9H2W1 248 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 YAE1D1Q9NRH1 226 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 DPM2O94777 84 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 SLC25A45Q8N413 288 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 SFTPCP11686 197 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 TFF3Q07654 80 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 CIARTQ8N365 385 aaPredicted RBP8.35□□□□□ -1.07
COL6A3-201ENST00000295550 KIR3DL3Q8N743 410 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 SLC25A15Q9Y619 301 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HIST1H2BKO60814 126 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HIST1H2BJP06899 126 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HIST1H2BOP23527 126 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HIST1H2BBP33778 126 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HIST1H2BDP58876 126 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HIST1H2BCP62807 126 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HIST2H2BEQ16778 126 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HIST1H2BHQ93079 126 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HIST1H2BNQ99877 126 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HIST1H2BMQ99879 126 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 NABP2Q9BQ15 211 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 MALP21145 153 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 HSPE1P61604 102 aaKnown RBP8.35□□□□□ -1.07
COL6A3-201ENST00000295550 PRR7Q8TB68 274 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 LEAP2Q969E1 77 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 SLC25A28Q96A46 364 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 PCNX3Q9H6A9 2034 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 IGKV3-20P01619 116 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 RPRMQ9NS64 109 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 ATXN8Q156A1 80 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 CCDC168Q8NDH2 2452 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 ESDP10768 282 aa8.35□□□□□ -1.07
COL6A3-201ENST00000295550 CRPP02741 224 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 608.6 ms