RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CEACAM4O75871 244 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 GPR183P32249 361 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 RAMP3O60896 148 aa10.65□□□□□ -0.71
PTCD1-201ENST00000292478 MRPS16Q9Y3D3 137 aaKnown RBP10.65□□□□□ -0.71
PTCD1-201ENST00000292478 NPFFO15130 113 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 ASCL2Q99929 193 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 RLFQ13129 1914 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 THSD7BQ9C0I4 1608 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 C7orf71A4D174 169 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 THBDP07204 575 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 TMEM170AQ8WVE7 144 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 SCN5AQ14524 2016 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 SPTA1P02549 2419 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.64□□□□□ -0.71
PTCD1-201ENST00000292478 MOB4Q9Y3A3 225 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 IGHV3OR16-10A0A075B7F0 116 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 TRAV1-1A0A0B4J248 108 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 PRSS8Q16651 343 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 Q6ZS49 121 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 TMEM242Q9NWH2 141 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 RPUSD1Q9UJJ7 312 aaKnown RBP10.64□□□□□ -0.71
PTCD1-201ENST00000292478 SBF1O95248 1867 aa10.64□□□□□ -0.71
PTCD1-201ENST00000292478 IGHV3OR16-12A0A075B7B8 117 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 A1L4Q6 167 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 NAPSAO96009 420 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 SOD3P08294 240 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 OR9G9P0C7N8 305 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 FER1L6-AS1Q8NA97 138 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 OR11H12B2RN74 326 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 OR11H1Q8NG94 326 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 OR11H2Q8NH07 326 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 RNF5Q99942 180 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 EPDR1Q9UM22 224 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 IGKV3-15P01624 115 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 ZNF600Q6ZNG1 722 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 MDS2Q8NDY4 140 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 GEMIN7Q9H840 131 aaKnown RBP10.63□□□□□ -0.71
PTCD1-201ENST00000292478 WFDC1Q9HC57 220 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 TBL2Q9Y4P3 447 aaKnown RBP10.63□□□□□ -0.71
PTCD1-201ENST00000292478 APOHP02749 345 aaPredicted RBP10.63□□□□□ -0.71
PTCD1-201ENST00000292478 CLEC19AQ6UXS0 136 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 C7orf69Q9H7B7 122 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 IGKV1-27A0A075B6S5 117 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 IGHV3-35A0A0C4DH35 117 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 LOC107984156A0A0G2JMH3 177 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 IGHV3-23P01764 117 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 MYOD1P15172 320 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 ARL17AQ8IVW1 177 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 ORMDL3Q8N138 153 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 RNF125Q96EQ8 232 aa10.63□□□□□ -0.71
PTCD1-201ENST00000292478 GBF1Q92538 1859 aa10.62□□□□□ -0.71
PTCD1-201ENST00000292478 SRSF4Q08170 494 aaKnown RBP10.62□□□□□ -0.71
PTCD1-201ENST00000292478 FAM74A4Q5TZK3 123 aa10.62□□□□□ -0.71
PTCD1-201ENST00000292478 FABP5P3A8MUU1 101 aa10.62□□□□□ -0.71
PTCD1-201ENST00000292478 CD5P06127 495 aa10.62□□□□□ -0.71
PTCD1-201ENST00000292478 CFPP27918 469 aa10.62□□□□□ -0.71
PTCD1-201ENST00000292478 FOXA3P55318 350 aaPredicted RBP10.62□□□□□ -0.71
PTCD1-201ENST00000292478 TCF23Q7RTU1 214 aa10.62□□□□□ -0.71
PTCD1-201ENST00000292478 OR4X2Q8NGF9 303 aa10.62□□□□□ -0.71
PTCD1-201ENST00000292478 MESP1Q9BRJ9 268 aa10.62□□□□□ -0.71
PTCD1-201ENST00000292478 PEMTQ9UBM1 199 aa10.62□□□□□ -0.71
PTCD1-201ENST00000292478 SUPT4H1P63272 117 aaKnown RBP10.62□□□□□ -0.71
PTCD1-201ENST00000292478 QRFPP83859 136 aa10.62□□□□□ -0.71
PTCD1-201ENST00000292478 ATRAIDQ6UW56 229 aa10.62□□□□□ -0.71
PTCD1-201ENST00000292478 GATA2P23769 480 aaPredicted RBP10.61□□□□□ -0.71
PTCD1-201ENST00000292478 OTX1P32242 354 aaPredicted RBP10.61□□□□□ -0.71
PTCD1-201ENST00000292478 FAM169BQ8N8A8 192 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 BMPERQ8N8U9 685 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 NEUROG1Q92886 237 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 OOSP1A8MZH6 123 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 PLP1P60201 277 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 Q0VFX4 171 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 EFNB3Q15768 340 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 HEPN1Q6WQI6 88 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 SLC25A15Q9Y619 301 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 SPTBP11277 2137 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 SPACA3Q8IXA5 215 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 TNFRSF18Q9Y5U5 241 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 C19orf67A6NJJ6 358 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 SMIM13P0DJ93 91 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 B3GALT5-AS1P59052 145 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 ZNF318Q5VUA4 2279 aa10.61□□□□□ -0.71
PTCD1-201ENST00000292478 HIGD1CA8MV81 97 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 C8orf46Q8TAG6 207 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 ALKBH7Q9BT30 221 aaPredicted RBP10.6□□□□□ -0.71
PTCD1-201ENST00000292478 CYTL1Q9NRR1 136 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 FAM181BA6NEQ2 426 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 PF4P02776 101 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 ARTNQ5T4W7 220 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 WFIKKN1Q96NZ8 548 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 KLK15Q9H2R5 256 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 CD55P08174 381 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 FOXF2Q12947 444 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 NMSQ5H8A3 153 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 PEF1Q9UBV8 284 aaKnown RBP10.6□□□□□ -0.71
PTCD1-201ENST00000292478 IGHV3OR16-13A0A075B7E8 117 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 IGHV3-74A0A0B4J1X5 117 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 IGHG3P01860 377 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 LEPP41159 167 aa10.6□□□□□ -0.71
PTCD1-201ENST00000292478 ASCL4Q6XD76 172 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms