RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 WIPF1O43516 503 aa20.64■□□□□ 0.89
SSU72-201ENST00000291386 RNASE2P10153 161 aaKnown RBP20.64■□□□□ 0.89
SSU72-201ENST00000291386 OR52B4Q8NGK2 314 aa20.64■□□□□ 0.89
SSU72-201ENST00000291386 CEBPZOSA8MTT3 80 aa20.63■□□□□ 0.89
SSU72-201ENST00000291386 FAM90A26D6RGX4 464 aa20.63■□□□□ 0.89
SSU72-201ENST00000291386 BEAN1Q3B7T3 259 aa20.63■□□□□ 0.89
SSU72-201ENST00000291386 NRARPQ7Z6K4 114 aa20.63■□□□□ 0.89
SSU72-201ENST00000291386 ZNF431Q8TF32 576 aaPredicted RBP20.63■□□□□ 0.89
SSU72-201ENST00000291386 SCARB1Q8WTV0 552 aa20.63■□□□□ 0.89
SSU72-201ENST00000291386 S4R3C0 116 aa20.63■□□□□ 0.89
SSU72-201ENST00000291386 I3L2K1 104 aa20.62■□□□□ 0.89
SSU72-201ENST00000291386 ADAP1O75689 374 aa20.62■□□□□ 0.89
SSU72-201ENST00000291386 IGHV3-23P01764 117 aa20.62■□□□□ 0.89
SSU72-201ENST00000291386 HTR2BP41595 481 aa20.62■□□□□ 0.89
SSU72-201ENST00000291386 RPEL1Q2QD12 228 aa20.62■□□□□ 0.89
SSU72-201ENST00000291386 CLEC19AQ6UXS0 136 aa20.62■□□□□ 0.89
SSU72-201ENST00000291386 HEYLQ9NQ87 328 aaPredicted RBP20.62■□□□□ 0.89
SSU72-201ENST00000291386 CORTO00230 105 aa20.61■□□□□ 0.89
SSU72-201ENST00000291386 GGCTO75223 188 aaKnown RBP20.61■□□□□ 0.89
SSU72-201ENST00000291386 IFNA21P01568 189 aa20.61■□□□□ 0.89
SSU72-201ENST00000291386 IL5P05113 134 aa20.61■□□□□ 0.89
SSU72-201ENST00000291386 CLEC3BP05452 202 aa20.61■□□□□ 0.89
SSU72-201ENST00000291386 FCGR2BP31994 310 aaPredicted RBP20.61■□□□□ 0.89
SSU72-201ENST00000291386 ARL3P36405 182 aa20.61■□□□□ 0.89
SSU72-201ENST00000291386 C9orf66Q5T8R8 295 aa20.61■□□□□ 0.89
SSU72-201ENST00000291386 MISP3Q96FF7 219 aa20.61■□□□□ 0.89
SSU72-201ENST00000291386 HIPK2Q9H2X6 1198 aa20.61■□□□□ 0.89
SSU72-201ENST00000291386 RBKSQ9H477 322 aa20.61■□□□□ 0.89
SSU72-201ENST00000291386 C21orf62Q9NYP8 219 aa20.61■□□□□ 0.89
SSU72-201ENST00000291386 NOTCH1P46531 2555 aa20.61■□□□□ 0.89
SSU72-201ENST00000291386 PPP5D1E7EU14 171 aa20.6■□□□□ 0.89
SSU72-201ENST00000291386 NXPH3O95157 252 aa20.6■□□□□ 0.89
SSU72-201ENST00000291386 TATDN3Q17R31 274 aa20.6■□□□□ 0.89
SSU72-201ENST00000291386 C2orf83Q53S99 150 aa20.6■□□□□ 0.89
SSU72-201ENST00000291386 ACSM6Q6P461 480 aa20.6■□□□□ 0.89
SSU72-201ENST00000291386 DTD1Q8TEA8 209 aa20.6■□□□□ 0.89
SSU72-201ENST00000291386 SEC22CQ9BRL7 303 aa20.6■□□□□ 0.89
SSU72-201ENST00000291386 SEC14L6B5MCN3 397 aa20.59■□□□□ 0.89
SSU72-201ENST00000291386 MT-CO2P00403 227 aa20.59■□□□□ 0.89
SSU72-201ENST00000291386 INSL3P51460 131 aa20.59■□□□□ 0.89
SSU72-201ENST00000291386 C1QL4Q86Z23 238 aa20.59■□□□□ 0.89
SSU72-201ENST00000291386 TXN2Q99757 166 aa20.59■□□□□ 0.89
SSU72-201ENST00000291386 F8W735 103 aaPredicted RBP20.58■□□□□ 0.89
SSU72-201ENST00000291386 PLET1Q6UQ28 207 aa20.58■□□□□ 0.89
SSU72-201ENST00000291386 GPHB5Q86YW7 130 aa20.58■□□□□ 0.89
SSU72-201ENST00000291386 SLC24A4Q8NFF2 622 aa20.58■□□□□ 0.89
SSU72-201ENST00000291386 GAR1Q9NY12 217 aaKnown RBP20.58■□□□□ 0.89
SSU72-201ENST00000291386 U3KQ87 197 aa20.58■□□□□ 0.89
SSU72-201ENST00000291386 IGHV3-21A0A0B4J1V1 117 aa20.57■□□□□ 0.88
SSU72-201ENST00000291386 MPTX1A8MV57 137 aa20.57■□□□□ 0.88
SSU72-201ENST00000291386 MED6O75586 246 aa20.57■□□□□ 0.88
SSU72-201ENST00000291386 GPR183P32249 361 aa20.57■□□□□ 0.88
SSU72-201ENST00000291386 ATP5IP56385 69 aaPredicted RBP20.57■□□□□ 0.88
SSU72-201ENST00000291386 SYNJ2BPP57105 145 aa20.57■□□□□ 0.88
SSU72-201ENST00000291386 EGFEM1PQ0D2K5 195 aa20.57■□□□□ 0.88
SSU72-201ENST00000291386 NOXA1Q86UR1 476 aa20.57■□□□□ 0.88
SSU72-201ENST00000291386 C12orf45Q8N5I9 185 aaPredicted RBP20.57■□□□□ 0.88
SSU72-201ENST00000291386 BSCL2Q96G97 398 aaPredicted RBP20.57■□□□□ 0.88
SSU72-201ENST00000291386 MARVELD1Q9BSK0 173 aa20.57■□□□□ 0.88
SSU72-201ENST00000291386 TGOLN2O43493 480 aa20.56■□□□□ 0.88
SSU72-201ENST00000291386 OR2C1O95371 312 aa20.56■□□□□ 0.88
SSU72-201ENST00000291386 MFAP4P55083 255 aa20.56■□□□□ 0.88
SSU72-201ENST00000291386 ID3Q02535 119 aa20.56■□□□□ 0.88
SSU72-201ENST00000291386 SPSB3Q6PJ21 355 aa20.56■□□□□ 0.88
SSU72-201ENST00000291386 OR4D5Q8NGN0 318 aa20.56■□□□□ 0.88
SSU72-201ENST00000291386 OR9G4Q8NGQ1 327 aa20.56■□□□□ 0.88
SSU72-201ENST00000291386 PINX1Q96BK5 328 aaKnown RBP20.56■□□□□ 0.88
SSU72-201ENST00000291386 PALMDQ9NP74 551 aa20.56■□□□□ 0.88
SSU72-201ENST00000291386 INMT-MINDY4F8WBC2 141 aa20.55■□□□□ 0.88
SSU72-201ENST00000291386 LGALS9O00182 355 aa20.55■□□□□ 0.88
SSU72-201ENST00000291386 PRAF2O60831 178 aa20.55■□□□□ 0.88
SSU72-201ENST00000291386 RNASEH2CQ8TDP1 164 aaKnown RBP20.55■□□□□ 0.88
SSU72-201ENST00000291386 TMEM170AQ8WVE7 144 aa20.55■□□□□ 0.88
SSU72-201ENST00000291386 ELOVL1Q9BW60 279 aa20.55■□□□□ 0.88
SSU72-201ENST00000291386 LY86O95711 162 aa20.54■□□□□ 0.88
SSU72-201ENST00000291386 NPY1RP25929 384 aa20.54■□□□□ 0.88
SSU72-201ENST00000291386 IL34Q6ZMJ4 242 aa20.54■□□□□ 0.88
SSU72-201ENST00000291386 REC114Q7Z4M0 266 aa20.54■□□□□ 0.88
SSU72-201ENST00000291386 OR10C1Q96KK4 312 aa20.54■□□□□ 0.88
SSU72-201ENST00000291386 GPN1Q9HCN4 374 aaPredicted RBP20.54■□□□□ 0.88
SSU72-201ENST00000291386 OR2T8A6NH00 312 aa20.53■□□□□ 0.88
SSU72-201ENST00000291386 SYNGR2O43760 224 aa20.53■□□□□ 0.88
SSU72-201ENST00000291386 Q56UQ5 140 aa20.53■□□□□ 0.88
SSU72-201ENST00000291386 C11orf87Q6NUJ2 197 aa20.53■□□□□ 0.88
SSU72-201ENST00000291386 CIB3Q96Q77 187 aaPredicted RBP20.53■□□□□ 0.88
SSU72-201ENST00000291386 ZNF436Q9C0F3 470 aaPredicted RBP20.53■□□□□ 0.88
SSU72-201ENST00000291386 FNDC4Q9H6D8 234 aaPredicted RBP20.53■□□□□ 0.88
SSU72-201ENST00000291386 SIGLEC8Q9NYZ4 499 aa20.53■□□□□ 0.88
SSU72-201ENST00000291386 PEMTQ9UBM1 199 aa20.53■□□□□ 0.88
SSU72-201ENST00000291386 ZMAT5Q9UDW3 170 aaKnown RBP20.53■□□□□ 0.88
SSU72-201ENST00000291386 DNAH3Q8TD57 4116 aa20.52■□□□□ 0.88
SSU72-201ENST00000291386 SNRPGP15A8MWD9 76 aa20.52■□□□□ 0.88
SSU72-201ENST00000291386 SAP30O75446 220 aa20.52■□□□□ 0.88
SSU72-201ENST00000291386 IFNA10P01566 189 aa20.52■□□□□ 0.88
SSU72-201ENST00000291386 CTSGP08311 255 aa20.52■□□□□ 0.88
SSU72-201ENST00000291386 IAH1Q2TAA2 248 aaPredicted RBP20.52■□□□□ 0.88
SSU72-201ENST00000291386 FAM106AQ4KMX7 169 aa20.52■□□□□ 0.88
SSU72-201ENST00000291386 ADMP35318 185 aa20.51■□□□□ 0.87
SSU72-201ENST00000291386 OPRK1P41145 380 aa20.51■□□□□ 0.87
SSU72-201ENST00000291386 NKX2-1P43699 371 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms