RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TRAV9-2A0A087WT02 112 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 IGHV2OR16-5A0A0B4J2B6 119 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 PRDM6Q9NQX0 595 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 NHP2Q9NX24 153 aaKnown RBP12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 C9orf172C9J069 976 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 EFNA2O43921 213 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 IGKV1D-33P01593 117 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 IGKV1-33P01594 117 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 LINC00614P0C842 121 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 CCL3L1P16619 93 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 CRIM1Q9NZV1 1036 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 PINLYPA6NC86 204 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 ELOVL5Q9NYP7 299 aa12.81□□□□□ -0.36
SHROOM4-201ENST00000289292 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
SHROOM4-201ENST00000289292 IFNL4K9M1U5 179 aa12.8□□□□□ -0.36
SHROOM4-201ENST00000289292 ID3Q02535 119 aa12.8□□□□□ -0.36
SHROOM4-201ENST00000289292 SAPCD1Q5SSQ6 148 aa12.8□□□□□ -0.36
SHROOM4-201ENST00000289292 TIMP3P35625 211 aa12.8□□□□□ -0.36
SHROOM4-201ENST00000289292 GZMBP10144 247 aa12.8□□□□□ -0.36
SHROOM4-201ENST00000289292 TMEM256Q8N2U0 113 aa12.8□□□□□ -0.36
SHROOM4-201ENST00000289292 A0A1W2PS18 150 aa12.8□□□□□ -0.36
SHROOM4-201ENST00000289292 TNFSF13O75888 250 aa12.8□□□□□ -0.36
SHROOM4-201ENST00000289292 NPPCP23582 126 aa12.8□□□□□ -0.36
SHROOM4-201ENST00000289292 EFNB3Q15768 340 aa12.8□□□□□ -0.36
SHROOM4-201ENST00000289292 EVI2AP22794 236 aa12.79□□□□□ -0.36
SHROOM4-201ENST00000289292 FBLN5Q9UBX5 448 aa12.79□□□□□ -0.36
SHROOM4-201ENST00000289292 SCGB3A1Q96QR1 104 aa12.79□□□□□ -0.36
SHROOM4-201ENST00000289292 LHFPL1Q86WI0 220 aa12.79□□□□□ -0.36
SHROOM4-201ENST00000289292 TRAV9-1A0A075B6T8 112 aa12.79□□□□□ -0.36
SHROOM4-201ENST00000289292 MEIG1Q5JSS6 88 aa12.79□□□□□ -0.36
SHROOM4-201ENST00000289292 DMRTC2Q8IXT2 367 aaPredicted RBP12.79□□□□□ -0.36
SHROOM4-201ENST00000289292 OR10W1Q8NGF6 305 aa12.79□□□□□ -0.36
SHROOM4-201ENST00000289292 IQCF6A8MYZ5 107 aa12.79□□□□□ -0.36
SHROOM4-201ENST00000289292 SMAGPQ0VAQ4 97 aa12.79□□□□□ -0.36
SHROOM4-201ENST00000289292 SBF1O95248 1867 aa12.79□□□□□ -0.36
SHROOM4-201ENST00000289292 C15orf61A6NNL5 157 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 CD24P25063 80 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 PPIFP30405 207 aaKnown RBP12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 LHX2P50458 406 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 FOXG1P55316 489 aaPredicted RBP12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 TMPRSS3P57727 454 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 EEF1AKMT3Q96AZ1 226 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 C5orf30Q96GV9 206 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 WDR90Q96KV7 1748 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 MORN2Q502X0 79 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 TEX38Q6PEX7 206 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 CD33P20138 364 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 ZNF664Q8N3J9 261 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 EREGO14944 169 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 ZCCHC24Q8N2G6 241 aaKnown RBP12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 OSR1Q8TAX0 266 aaPredicted RBP12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 TMEM171Q8WVE6 324 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 PSMB11A5LHX3 300 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 NPIPB6E9PJ23 425 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 CLPSP04118 112 aa12.78□□□□□ -0.36
SHROOM4-201ENST00000289292 FER1L6-AS1Q8NA97 138 aa12.77□□□□□ -0.36
SHROOM4-201ENST00000289292 RNASE4P34096 147 aaKnown RBP12.77□□□□□ -0.36
SHROOM4-201ENST00000289292 FXYD7P58549 80 aa12.77□□□□□ -0.36
SHROOM4-201ENST00000289292 TMEM95Q3KNT9 176 aa12.77□□□□□ -0.36
SHROOM4-201ENST00000289292 OR10J3Q5JRS4 329 aa12.77□□□□□ -0.36
SHROOM4-201ENST00000289292 FAM71F2Q6NXP2 309 aa12.77□□□□□ -0.36
SHROOM4-201ENST00000289292 CHRNA10Q9GZZ6 450 aa12.77□□□□□ -0.36
SHROOM4-201ENST00000289292 ALPK2Q86TB3 2170 aa12.77□□□□□ -0.37
SHROOM4-201ENST00000289292 NEUROG1Q92886 237 aa12.77□□□□□ -0.37
SHROOM4-201ENST00000289292 IMMP1LQ96LU5 166 aa12.77□□□□□ -0.37
SHROOM4-201ENST00000289292 UPK2O00526 184 aa12.77□□□□□ -0.37
SHROOM4-201ENST00000289292 PPP1R17O96001 155 aa12.77□□□□□ -0.37
SHROOM4-201ENST00000289292 MEF2CQ06413 473 aaPredicted RBP12.77□□□□□ -0.37
SHROOM4-201ENST00000289292 C1orf194Q5T5A4 169 aa12.77□□□□□ -0.37
SHROOM4-201ENST00000289292 KIR2DL4Q99706 377 aa12.77□□□□□ -0.37
SHROOM4-201ENST00000289292 IGHV4-39P01824 125 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 LINC00205P59089 165 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 BSPH1Q075Z2 132 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 FAM159AQ6UWV7 190 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 FBXL7Q9UJT9 491 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 RNF115Q9Y4L5 304 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 SCN5AQ14524 2016 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 CLEC19AQ6UXS0 136 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 C9orf106Q8NAJ2 232 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 GLMPQ8WWB7 406 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 MBD3L1Q8WWY6 194 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 NUDT11Q96G61 164 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 DUX5Q96PT3 197 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 SIGMAR1Q99720 223 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 COLQQ9Y215 455 aaPredicted RBP12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 ZNF257Q9Y2Q1 563 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 NDUFA2O43678 99 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 GDF15Q99988 308 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 C9JQL5 133 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 ORMDL3Q8N138 153 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 DEFB104AQ8WTQ1 72 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 SEC16AO15027 2179 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 TRAV8-2A0A0B4J237 113 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 MAJINQ3KP22 176 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 GNB1LQ9BYB4 327 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 CHODLQ9H9P2 273 aa12.76□□□□□ -0.37
SHROOM4-201ENST00000289292 EPDR1Q9UM22 224 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 MPDZO75970 2070 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 ACTL10Q5JWF8 245 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms