RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ZNF600Q6ZNG1 722 aa15.42■□□□□ 0.06
PCDH1-201ENST00000287008 C15orf61A6NNL5 157 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 FAM166AQ6J272 317 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 VWA8A3KMH1 1905 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 IGKV1-12A0A0C4DH73 117 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 DIRC3C9JPN6 131 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 CGAP01215 116 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 IGKV1D-12P01611 117 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 DUTP33316 252 aaKnown RBP15.41■□□□□ 0.06
PCDH1-201ENST00000287008 PUSL1Q8N0Z8 303 aaKnown RBP15.41■□□□□ 0.06
PCDH1-201ENST00000287008 DPH3Q96FX2 82 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 SSC4DQ8WTU2 575 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 DUX3Q96PT4 197 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 M0R381 172 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 NMUP48645 174 aa15.41■□□□□ 0.06
PCDH1-201ENST00000287008 IGKV3OR2-268A0A0C4DH90 116 aa15.4■□□□□ 0.06
PCDH1-201ENST00000287008 TFF3Q07654 80 aa15.4■□□□□ 0.06
PCDH1-201ENST00000287008 TCRBV4S1A1TA0A5B7 111 aa15.4■□□□□ 0.06
PCDH1-201ENST00000287008 LEPROTL1O95214 131 aa15.4■□□□□ 0.06
PCDH1-201ENST00000287008 GATA2P23769 480 aaPredicted RBP15.4■□□□□ 0.06
PCDH1-201ENST00000287008 ASIPP42127 132 aa15.4■□□□□ 0.06
PCDH1-201ENST00000287008 TRBV20OR9-2A0A075B6H5 130 aa15.4■□□□□ 0.06
PCDH1-201ENST00000287008 PVRIGQ6DKI7 326 aa15.4■□□□□ 0.06
PCDH1-201ENST00000287008 ZNF474Q6S9Z5 364 aaPredicted RBP15.4■□□□□ 0.06
PCDH1-201ENST00000287008 NR2C2APQ86WQ0 139 aa15.4■□□□□ 0.06
PCDH1-201ENST00000287008 OR4C46A6NHA9 309 aa15.4■□□□□ 0.06
PCDH1-201ENST00000287008 B3GALT5-AS1P59052 145 aa15.4■□□□□ 0.06
PCDH1-201ENST00000287008 SDHCQ99643 169 aaPredicted RBP15.4■□□□□ 0.06
PCDH1-201ENST00000287008 PAM16Q9Y3D7 125 aa15.4■□□□□ 0.06
PCDH1-201ENST00000287008 SLC25A28Q96A46 364 aa15.39■□□□□ 0.05
PCDH1-201ENST00000287008 KLK15Q9H2R5 256 aa15.39■□□□□ 0.05
PCDH1-201ENST00000287008 PHF3Q92576 2039 aaKnown RBP15.39■□□□□ 0.05
PCDH1-201ENST00000287008 OOSP1A8MZH6 123 aa15.39■□□□□ 0.05
PCDH1-201ENST00000287008 TMEM262E9PQX1 116 aa15.39■□□□□ 0.05
PCDH1-201ENST00000287008 ZP1P60852 638 aa15.39■□□□□ 0.05
PCDH1-201ENST00000287008 MRPL18Q9H0U6 180 aaKnown RBP15.39■□□□□ 0.05
PCDH1-201ENST00000287008 IGHV2-26A0A0B4J1V2 119 aa15.39■□□□□ 0.05
PCDH1-201ENST00000287008 TRGC2P03986 189 aa15.39■□□□□ 0.05
PCDH1-201ENST00000287008 PLA2G2CQ5R387 149 aa15.39■□□□□ 0.05
PCDH1-201ENST00000287008 LINC01587Q99440 93 aa15.39■□□□□ 0.05
PCDH1-201ENST00000287008 GEMIN7Q9H840 131 aaKnown RBP15.39■□□□□ 0.05
PCDH1-201ENST00000287008 GTF3C1Q12789 2109 aa15.38■□□□□ 0.05
PCDH1-201ENST00000287008 DOCK9Q9BZ29 2069 aa15.38■□□□□ 0.05
PCDH1-201ENST00000287008 RNF125Q96EQ8 232 aa15.38■□□□□ 0.05
PCDH1-201ENST00000287008 DPRXA6NFQ7 191 aa15.38■□□□□ 0.05
PCDH1-201ENST00000287008 LDLRAD2Q5SZI1 272 aa15.38■□□□□ 0.05
PCDH1-201ENST00000287008 RLFQ13129 1914 aa15.38■□□□□ 0.05
PCDH1-201ENST00000287008 PEX7O00628 323 aa15.38■□□□□ 0.05
PCDH1-201ENST00000287008 IGHV1-8P0DP01 117 aa15.38■□□□□ 0.05
PCDH1-201ENST00000287008 HSPB9Q9BQS6 159 aa15.38■□□□□ 0.05
PCDH1-201ENST00000287008 LINC00527Q9UJ94 153 aa15.38■□□□□ 0.05
PCDH1-201ENST00000287008 ANK1P16157 1881 aa15.38■□□□□ 0.05
PCDH1-201ENST00000287008 J3QRE1 110 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 HTN3P15516 51 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 MINOS1Q5TGZ0 78 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 MINOS1-NBL1R4GNA1 71 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 PSPNO60542 156 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 FNDC1Q4ZHG4 1894 aaPredicted RBP15.37■□□□□ 0.05
PCDH1-201ENST00000287008 A6NDN8 102 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 CBY3A6NI87 242 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 PRSS2P07478 247 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 NBL1P41271 181 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 SFRP2Q96HF1 295 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 TNFRSF18Q9Y5U5 241 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 MPTX1A8MV57 137 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 NPFFO15130 113 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 SLC25A16P16260 332 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 PRSS8Q16651 343 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 KIAA1644Q3SXP7 199 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 ZNF525Q8N782 197 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 SLC50A1Q9BRV3 221 aa15.37■□□□□ 0.05
PCDH1-201ENST00000287008 TRAV14DV4A0A0A6YYC5 116 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 SRIP30626 198 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 NHLRC3Q5JS37 347 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 COL25A1Q9BXS0 654 aaPredicted RBP15.36■□□□□ 0.05
PCDH1-201ENST00000287008 TRGV2A0A075B6R0 118 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 RAMP3O60896 148 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 VENTXO95231 258 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 PRCDQ00LT1 54 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 OR10AG1Q8NH19 301 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 CRIM1Q9NZV1 1036 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 CXorf65A6NEN9 183 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 EMP1P54849 157 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 VMO1Q7Z5L0 202 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 PRR30Q53SZ7 412 aaPredicted RBP15.36■□□□□ 0.05
PCDH1-201ENST00000287008 TMEM200BQ69YZ2 307 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 STHQ8IWL8 128 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 TMEM70Q9BUB7 260 aa15.36■□□□□ 0.05
PCDH1-201ENST00000287008 TRAV41A0A0B4J266 112 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 ADIPOQQ15848 244 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 ZNF324BQ6AW86 544 aaPredicted RBP15.35■□□□□ 0.05
PCDH1-201ENST00000287008 CSPG4Q6UVK1 2322 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 ZNF506Q5JVG8 444 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 TMEM167AQ8TBQ9 72 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 H3BUX3 64 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 PPP1R17O96001 155 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 HBBP68871 147 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 MIR17HGQ75NE6 70 aa15.35■□□□□ 0.05
PCDH1-201ENST00000287008 CIARTQ8N365 385 aaPredicted RBP15.35■□□□□ 0.05
PCDH1-201ENST00000287008 PTPN13Q12923 2485 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms