RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SHROOM3Q8TF72 1996 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 IGHV5-51A0A0C4DH38 117 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 A0A1B0GX51 115 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 J3KT08 172 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 UBFD1O14562 309 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 PAEPP09466 180 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 FABP2P12104 132 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 DAZ2Q13117 558 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 KDM4DQ6B0I6 523 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 DAZ4Q86SG3 579 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 PRIMA1Q86XR5 153 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 ARIH2OSQ8N7S6 290 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 OR52L1Q8NGH7 329 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 OR4X1Q8NH49 305 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 C20orf27Q9GZN8 174 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 ZNF696Q9H7X3 374 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 DAZ1Q9NQZ3 744 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 DAZ3Q9NR90 486 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 ZNF222Q9UK12 451 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 TMEM56-RWDD3S4R434 201 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 TNRC6BQ9UPQ9 1833 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 IGLV1-50A0A075B6I6 118 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 IGHV3-23P01764 117 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 CRYGDP07320 174 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 TFPTP0C1Z6 253 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 RPS24P62847 133 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 RPL30P62888 115 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 MEF2BQ02080 365 aaPredicted RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 EMX2Q04743 252 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 PRNTQ86SH4 94 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 ORMDL3Q8N138 153 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 TMEM86BQ8N661 226 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 OR2T4Q8NH00 348 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 GTSF1Q8WW33 167 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 NDFIP1Q9BT67 221 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 CHCHD7Q9BUK0 85 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 PLA2G12AQ9BZM1 189 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 PLA2G2FQ9BZM2 168 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 C11orf68Q9H3H3 251 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 OSTCQ9NRP0 149 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 FBXL12Q9NXK8 326 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 TRAPPC2LQ9UL33 140 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 TDRD6O60522 2096 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 GRIFINA4D1Z8 144 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 LINC00587B1AMM8 73 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 PPP1R3DO95685 299 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 OR8B8Q15620 311 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 UBE2SQ16763 222 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 CLLU1OSQ5K130 101 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 CASC10Q5T4H9 136 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 CLEC20AQ6ZU45 233 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 ZIC4Q8N9L1 334 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 SUMF2Q8NBJ7 301 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 LINC01560Q8TB33 94 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 TCF20Q9UGU0 1960 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 A0A096LPI6 279 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 C4orf51C9J302 202 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 K7EP13 123 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 IGLV3-19P01714 112 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 HLA-DQA1P01909 254 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 LINC00205P59089 165 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 NCS1P62166 190 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 SPANXN3Q5MJ09 141 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 NPBQ8NG41 125 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 PLEKHB2Q96CS7 222 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 YPEL2Q96QA6 119 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 SLC17A9Q9BYT1 436 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 RERGLQ9H628 205 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 JPT1Q9UK76 154 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 VPREB3Q9UKI3 123 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 ZNF638Q14966 1978 aaKnown RBP2.03□□□□□ -2.08
CHD1-201ENST00000284049 MALRD1Q5VYJ5 2156 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 TRIP11Q15643 1979 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 EPOPA6NHQ4 379 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 C5orf58C9J3I9 102 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 INMT-MINDY4F8WBC2 141 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 ZNF354AO60765 605 aaPredicted RBP2.03□□□□□ -2.08
CHD1-201ENST00000284049 KHDC3LQ587J8 217 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 FBXW12Q6X9E4 464 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 SLC25A40Q8TBP6 338 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 ZNRD1Q9P1U0 126 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 TIMM9Q9Y5J7 89 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 BDP1A6H8Y1 2624 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 TNRC18O15417 2968 aaPredicted RBP2.03□□□□□ -2.08
CHD1-201ENST00000284049 COL27A1Q8IZC6 1860 aaPredicted RBP2.03□□□□□ -2.08
CHD1-201ENST00000284049 MYO16Q9Y6X6 1858 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 IGHV3-49A0A0A0MS15 119 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 WI2-2373I1.2A0A1W2PRP0 233 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 OPN1SWP03999 348 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 OPRK1P41145 380 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 RBM11P57052 281 aaKnown RBP2.03□□□□□ -2.08
CHD1-201ENST00000284049 RUNX1Q01196 453 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 DHRS2Q13268 280 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 LUZP6Q538Z0 58 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 CYB5R2Q6BCY4 276 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 Q6ZRU5 148 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 TMEM86AQ8N2M4 240 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 NAT8Q9UHE5 227 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 NEU3Q9UQ49 428 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 H3BSA7 217 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms