RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 C1QL4Q86Z23 238 aa13.4□□□□□ -0.26
ATG3-201ENST00000283290 DTD1Q8TEA8 209 aa13.4□□□□□ -0.26
ATG3-201ENST00000283290 CHAC2Q8WUX2 184 aa13.4□□□□□ -0.26
ATG3-201ENST00000283290 DPF1Q92782 380 aa13.4□□□□□ -0.26
ATG3-201ENST00000283290 USMG5Q96IX5 58 aa13.4□□□□□ -0.26
ATG3-201ENST00000283290 ALG5Q9Y673 324 aa13.4□□□□□ -0.26
ATG3-201ENST00000283290 IGHV3-35A0A0C4DH35 117 aa13.39□□□□□ -0.27
ATG3-201ENST00000283290 K7EIM0 57 aa13.39□□□□□ -0.27
ATG3-201ENST00000283290 PFDN1O60925 122 aa13.39□□□□□ -0.27
ATG3-201ENST00000283290 CD33P20138 364 aa13.39□□□□□ -0.27
ATG3-201ENST00000283290 MYCNOSP40205 109 aa13.39□□□□□ -0.27
ATG3-201ENST00000283290 RUNX1Q01196 453 aa13.39□□□□□ -0.27
ATG3-201ENST00000283290 UBAC2Q8NBM4 344 aa13.39□□□□□ -0.27
ATG3-201ENST00000283290 OR1P1Q8NH06 330 aa13.39□□□□□ -0.27
ATG3-201ENST00000283290 WDR89Q96FK6 387 aaPredicted RBP13.39□□□□□ -0.27
ATG3-201ENST00000283290 C7orf66A4D0T2 115 aa13.38□□□□□ -0.27
ATG3-201ENST00000283290 C5orf51A6NDU8 294 aa13.38□□□□□ -0.27
ATG3-201ENST00000283290 LINC01619G3V211 115 aa13.38□□□□□ -0.27
ATG3-201ENST00000283290 G3V4G9 280 aa13.38□□□□□ -0.27
ATG3-201ENST00000283290 WRBO00258 174 aa13.38□□□□□ -0.27
ATG3-201ENST00000283290 IGLL1P15814 213 aa13.38□□□□□ -0.27
ATG3-201ENST00000283290 HIST1H1BP16401 226 aaKnown RBP13.38□□□□□ -0.27
ATG3-201ENST00000283290 GPR183P32249 361 aa13.38□□□□□ -0.27
ATG3-201ENST00000283290 POLR2GP62487 172 aaKnown RBP eCLIP13.38□□□□□ -0.27
ATG3-201ENST00000283290 FHL3Q13643 280 aa13.38□□□□□ -0.27
ATG3-201ENST00000283290 PDLIM3Q53GG5 364 aaPredicted RBP13.38□□□□□ -0.27
ATG3-201ENST00000283290 OR4D5Q8NGN0 318 aa13.38□□□□□ -0.27
ATG3-201ENST00000283290 SCARB1Q8WTV0 552 aa13.38□□□□□ -0.27
ATG3-201ENST00000283290 DCUN1D4Q92564 292 aa13.38□□□□□ -0.27
ATG3-201ENST00000283290 DLX4Q92988 240 aaPredicted RBP13.38□□□□□ -0.27
ATG3-201ENST00000283290 PEF1Q9UBV8 284 aaKnown RBP13.38□□□□□ -0.27
ATG3-201ENST00000283290 H3BP45 60 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 BMPR1BO00238 502 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 GOSR2O14653 212 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 PRAF2O60831 178 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 MT-CO2P00403 227 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 HSPB1P04792 205 aaKnown RBP13.37□□□□□ -0.27
ATG3-201ENST00000283290 HOXD3P31249 432 aaPredicted RBP13.37□□□□□ -0.27
ATG3-201ENST00000283290 OXLD1Q5BKU9 147 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 ZBTB8BQ8NAP8 495 aaPredicted RBP13.37□□□□□ -0.27
ATG3-201ENST00000283290 ZNF114Q8NC26 417 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 WFDC9Q8NEX5 89 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 EEF1AKMT3Q96AZ1 226 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 GPN1Q9HCN4 374 aaPredicted RBP13.37□□□□□ -0.27
ATG3-201ENST00000283290 MRPL36Q9P0J6 103 aaKnown RBP13.37□□□□□ -0.27
ATG3-201ENST00000283290 OR2T8A6NH00 312 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 I3L2K1 104 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 IFNA10P01566 189 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 SLC25A6P12236 298 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 KLK9Q2XQG4 91 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 BSXQ3C1V8 233 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 SLC24A4Q8NFF2 622 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 ZNF502Q8TBZ5 544 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 HIPK2Q9H2X6 1198 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 FNDC4Q9H6D8 234 aaPredicted RBP13.37□□□□□ -0.27
ATG3-201ENST00000283290 KLK9Q9UKQ9 250 aa13.37□□□□□ -0.27
ATG3-201ENST00000283290 PAIP2BQ9ULR5 123 aaKnown RBP13.37□□□□□ -0.27
ATG3-201ENST00000283290 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.36□□□□□ -0.27
ATG3-201ENST00000283290 F8W735 103 aaPredicted RBP13.36□□□□□ -0.27
ATG3-201ENST00000283290 INS-IGF2F8WCM5 200 aa13.36□□□□□ -0.27
ATG3-201ENST00000283290 SSSCA1O60232 199 aa13.36□□□□□ -0.27
ATG3-201ENST00000283290 CLEC3BP05452 202 aa13.36□□□□□ -0.27
ATG3-201ENST00000283290 SAMD5Q5TGI4 173 aa13.36□□□□□ -0.27
ATG3-201ENST00000283290 NEURL2Q9BR09 285 aa13.36□□□□□ -0.27
ATG3-201ENST00000283290 RANGRFQ9HD47 186 aaPredicted RBP13.36□□□□□ -0.27
ATG3-201ENST00000283290 SELENOKQ9Y6D0 94 aa13.36□□□□□ -0.27
ATG3-201ENST00000283290 PIGBOS1A0A0B4J2F0 54 aa13.35□□□□□ -0.27
ATG3-201ENST00000283290 SYNGR2O43760 224 aa13.35□□□□□ -0.27
ATG3-201ENST00000283290 OR2C1O95371 312 aa13.35□□□□□ -0.27
ATG3-201ENST00000283290 EDN2P20800 178 aa13.35□□□□□ -0.27
ATG3-201ENST00000283290 NPY1RP25929 384 aa13.35□□□□□ -0.27
ATG3-201ENST00000283290 ARL3P36405 182 aa13.35□□□□□ -0.27
ATG3-201ENST00000283290 NKX2-1P43699 371 aaPredicted RBP13.35□□□□□ -0.27
ATG3-201ENST00000283290 SYNJ2BPP57105 145 aa13.35□□□□□ -0.27
ATG3-201ENST00000283290 THYN1Q9P016 225 aa13.35□□□□□ -0.27
ATG3-201ENST00000283290 IGHV3OR16-8A0A075B7F1 116 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 SSNA1O43805 119 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 TMEM50AO95807 157 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 MBPP02686 304 aaPredicted RBP13.34□□□□□ -0.27
ATG3-201ENST00000283290 OR8U8P0C7N1 319 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 OPRK1P41145 380 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 HTR2BP41595 481 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 ID3Q02535 119 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 Q56UQ5 140 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 CXorf58Q96LI9 332 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 OR4C12Q96R67 309 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 CHRDL1Q9BU40 450 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 C21orf62Q9NYP8 219 aa13.34□□□□□ -0.27
ATG3-201ENST00000283290 LSM5Q9Y4Y9 91 aaKnown RBP13.34□□□□□ -0.27
ATG3-201ENST00000283290 C15orf62A8K5M9 175 aa13.33□□□□□ -0.28
ATG3-201ENST00000283290 SNRPGP15A8MWD9 76 aa13.33□□□□□ -0.28
ATG3-201ENST00000283290 CYB5BO43169 146 aa13.33□□□□□ -0.28
ATG3-201ENST00000283290 SUB1P53999 127 aaKnown RBP eCLIP13.33□□□□□ -0.28
ATG3-201ENST00000283290 RPEL1Q2QD12 228 aa13.33□□□□□ -0.28
ATG3-201ENST00000283290 GSG1LQ6UXU4 331 aa13.33□□□□□ -0.28
ATG3-201ENST00000283290 HAPLN4Q86UW8 402 aa13.33□□□□□ -0.28
ATG3-201ENST00000283290 RCL1Q9Y2P8 373 aaKnown RBP13.33□□□□□ -0.28
ATG3-201ENST00000283290 DNAH3Q8TD57 4116 aa13.33□□□□□ -0.28
ATG3-201ENST00000283290 TRBV7-1A0A0A6YYK4 115 aa13.32□□□□□ -0.28
ATG3-201ENST00000283290 RRAS2P62070 204 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms