RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 HIST1H2BMQ99879 126 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 A0A087X0K7 114 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 SRSF3P84103 164 aaKnown RBP9.5□□□□□ -0.89
CHFR-201ENST00000266880 TSSC4Q9Y5U2 329 aaPredicted RBP9.5□□□□□ -0.89
CHFR-201ENST00000266880 GAGE12JA6NER3 117 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 GAGE7O76087 117 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 HBDP02042 147 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 GAGE12FP0CL80 117 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 GAGE12GP0CL81 117 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 GAGE12IP0CL82 117 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 GAGE4Q13068 117 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 PRR31Q5SQ13 230 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 LDLRAD1Q5T700 205 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 DMRTC2Q8IXT2 367 aaPredicted RBP9.5□□□□□ -0.89
CHFR-201ENST00000266880 C19orf24Q9BVV8 132 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 ST20Q9HBF5 79 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 THADAQ6YHU6 1953 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 IGHV3OR16-8A0A075B7F1 116 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 RASL10BQ96S79 203 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 LINC01587Q99440 93 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 DSCAML1Q8TD84 2053 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 MGST3O14880 152 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 IGKCP01834 107 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 CD28P10747 220 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 DUX4L9Q6RFH8 374 aaPredicted RBP9.5□□□□□ -0.89
CHFR-201ENST00000266880 DLX4Q92988 240 aaPredicted RBP9.5□□□□□ -0.89
CHFR-201ENST00000266880 IGLV3-16A0A075B6K0 115 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 LINC00158P58513 81 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 ZNF146Q15072 292 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 RPL39P5Q59GN2 51 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 GLMPQ8WWB7 406 aa9.5□□□□□ -0.89
CHFR-201ENST00000266880 DOPEY1Q5JWR5 2465 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 J3KT08 172 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 TNFSF13O75888 250 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 IGKV1D-42A0A075B6H8 117 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 IGHV1OR21-1A0A087WYE8 117 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 RPL34P49207 117 aaKnown RBP9.49□□□□□ -0.89
CHFR-201ENST00000266880 PRB3Q04118 309 aaPredicted RBP9.49□□□□□ -0.89
CHFR-201ENST00000266880 NHSQ6T4R5 1651 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 TRBV5-5A0A0J9YX44 114 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 INO80CQ6PI98 192 aaPredicted RBP9.49□□□□□ -0.89
CHFR-201ENST00000266880 DPH3P1Q9H4G8 78 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 OTOGLQ3ZCN5 2332 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 LIFP15018 202 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 DNM1P46Q6ZS02 220 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 ZNF688P0C7X2 276 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 PRB4P10163 310 aaPredicted RBP9.49□□□□□ -0.89
CHFR-201ENST00000266880 ZP1P60852 638 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 GDF15Q99988 308 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 Q9H3A6 140 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 NPPCP23582 126 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 MPV17P39210 176 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 SRFP11831 508 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 ZIC1Q15915 447 aa9.49□□□□□ -0.89
CHFR-201ENST00000266880 GTSCR1Q86UQ5 136 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 LOC101059948A0A1B0GTJ6 334 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 VWC2LB2RUY7 222 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 ERVK11-1P61568 191 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 TMEM196Q5HYL7 178 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 ITLN2Q8WWU7 325 aaPredicted RBP9.48□□□□□ -0.89
CHFR-201ENST00000266880 WBP1LQ9NX94 342 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 SCN10AQ9Y5Y9 1956 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 RALGAPA2Q2PPJ7 1873 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 C22orf46C9J442 243 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 LINC01565O15544 149 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 GZMBP10144 247 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 CD33P20138 364 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 CD300EQ496F6 205 aaPredicted RBP9.48□□□□□ -0.89
CHFR-201ENST00000266880 LCNL1Q6ZST4 164 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 SRSF8Q9BRL6 282 aaKnown RBP9.48□□□□□ -0.89
CHFR-201ENST00000266880 TUBA4BQ9H853 241 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 IGFBP2P18065 325 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 Q6ZS52 159 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 HIST3H2BBQ8N257 126 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 PCDH15Q96QU1 1955 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 COL16A1Q07092 1604 aaPredicted RBP9.48□□□□□ -0.89
CHFR-201ENST00000266880 C2CD4DB7Z1M9 353 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 SPINT1O43278 529 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 IGHV2-70P01814 119 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 MIR17HGQ75NE6 70 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 ZNF385AQ96PM9 386 aaKnown RBP9.48□□□□□ -0.89
CHFR-201ENST00000266880 DCTN5Q9BTE1 182 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 C16orf97H3BN30 126 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 TMEM74BQ9NUR3 256 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 CENPVL1A0A0U1RR11 272 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 KLF12Q9Y4X4 402 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 FCN3O75636 299 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 MRPL55Q7Z7F7 128 aaKnown RBP9.48□□□□□ -0.89
CHFR-201ENST00000266880 SPEM1Q8N4L4 309 aa9.48□□□□□ -0.89
CHFR-201ENST00000266880 A0A1W2PQD3 144 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 EGR4Q05215 589 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 KIR3DS1Q14943 382 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 CLEC7AQ9BXN2 247 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 FOXA2Q9Y261 457 aaPredicted RBP9.47□□□□□ -0.89
CHFR-201ENST00000266880 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.47□□□□□ -0.89
CHFR-201ENST00000266880 DEFB124Q8NES8 71 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 TRAV9-1A0A075B6T8 112 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 hDV102S1A0JD36 115 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 NCR2O95944 276 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms