RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 C15orf62A8K5M9 175 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 HSBP1L1C9JCN9 74 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 ASPHD1Q5U4P2 390 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 C10orf113Q5VZT2 155 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 WASHC3Q9Y3C0 194 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 TMEM183BQ1AE95 376 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 Q6ZS92 163 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 FAM222BQ8WU58 562 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 MRPL20Q9BYC9 149 aaKnown RBP16.39■□□□□ 0.21
CSPG5-201ENST00000264723 DCAF16Q9NXF7 216 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 S4R3C0 116 aa16.39■□□□□ 0.21
CSPG5-201ENST00000264723 IGKV3-7A0A075B6H7 116 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 SERTM2A0A1B0GWG4 89 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 CD24P25063 80 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 IBA57Q5T440 356 aaKnown RBP16.38■□□□□ 0.21
CSPG5-201ENST00000264723 LINC01551Q86U37 167 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 PDPNQ86YL7 162 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 CHD3Q12873 2000 aaKnown RBP16.38■□□□□ 0.21
CSPG5-201ENST00000264723 GCGP01275 180 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 Q6ZR03 302 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 OR9G1Q8NH87 305 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 CCDC168Q8NDH2 2452 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 DIRC3C9JPN6 131 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 SRIP30626 198 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 APOBEC3AP31941 199 aaPredicted RBP16.38■□□□□ 0.21
CSPG5-201ENST00000264723 FAM19A2Q8N3H0 131 aa16.38■□□□□ 0.21
CSPG5-201ENST00000264723 MBNL3Q9NUK0 354 aaKnown RBP16.38■□□□□ 0.21
CSPG5-201ENST00000264723 TRBV6-6A0A0A6YYG2 114 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 K7EM74 188 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 ADMP35318 185 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 ZNF785A8K8V0 405 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 MOSP00540 346 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 IGKV3-15P01624 115 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 IGHV2-70P01814 119 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 HNRNPA3P51991 378 aaKnown RBP16.37■□□□□ 0.21
CSPG5-201ENST00000264723 TCTAP57738 103 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 PRSS8Q16651 343 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 DUX4L9Q6RFH8 374 aaPredicted RBP16.37■□□□□ 0.21
CSPG5-201ENST00000264723 Q6ZN92 141 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 OR4C13Q8NGP0 309 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 GGTLC1Q9BX51 225 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 ELOVL5Q9NYP7 299 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 C10orf55Q5SWW7 151 aa16.37■□□□□ 0.21
CSPG5-201ENST00000264723 LY6HO94772 140 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 TIMP3P35625 211 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 EFNB3Q15768 340 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 ECSCRQ19T08 205 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 RASL11BQ9BPW5 248 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 PAXXQ9BUH6 204 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 A0A0G2JNJ9 132 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 VENTXO95231 258 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 Q6ZSR3 168 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 TMEM170AQ8WVE7 144 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 Q9UFV3 132 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 SERF1AO75920 110 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 ARL3P36405 182 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 ZNF596Q8TC21 504 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 NEUROG1Q92886 237 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 PLXNB1O43157 2135 aa16.36■□□□□ 0.21
CSPG5-201ENST00000264723 JOSD1Q15040 202 aaPredicted RBP16.35■□□□□ 0.21
CSPG5-201ENST00000264723 ZNF114Q8NC26 417 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 MGST2Q99735 147 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 IGKV1D-17A0A075B6S4 117 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 IGHV3OR16-10A0A075B7F0 116 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.35■□□□□ 0.21
CSPG5-201ENST00000264723 ODF3L1Q8IXM7 274 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 NOL4LQ96MY1 436 aaPredicted RBP16.35■□□□□ 0.21
CSPG5-201ENST00000264723 WNT10AQ9GZT5 417 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 TRAV5A0A0B4J249 113 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 OR4F17Q8NGA8 305 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 C14orf144Q96I85 54 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 EAF1Q96JC9 268 aaPredicted RBP16.35■□□□□ 0.21
CSPG5-201ENST00000264723 SCRT1Q9BWW7 348 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 B9A039 149 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 PFN1P07737 140 aaKnown RBP16.35■□□□□ 0.21
CSPG5-201ENST00000264723 MC5RP33032 325 aa16.35■□□□□ 0.21
CSPG5-201ENST00000264723 LRP4O75096 1905 aa16.34■□□□□ 0.21
CSPG5-201ENST00000264723 MBD3L4A6NDZ8 208 aaPredicted RBP16.34■□□□□ 0.21
CSPG5-201ENST00000264723 MBD3L3A6NE82 208 aaPredicted RBP16.34■□□□□ 0.21
CSPG5-201ENST00000264723 MBD3L5A6NJ08 208 aaPredicted RBP16.34■□□□□ 0.21
CSPG5-201ENST00000264723 KLRB1Q12918 225 aa16.34■□□□□ 0.21
CSPG5-201ENST00000264723 MBD3L2Q8NHZ7 208 aaPredicted RBP16.34■□□□□ 0.21
CSPG5-201ENST00000264723 PGPA6NDG6 321 aa16.34■□□□□ 0.21
CSPG5-201ENST00000264723 M0R2Z0 102 aa16.34■□□□□ 0.21
CSPG5-201ENST00000264723 APCSP02743 223 aa16.34■□□□□ 0.21
CSPG5-201ENST00000264723 FBXL15Q9H469 300 aa16.34■□□□□ 0.21
CSPG5-201ENST00000264723 ZNF664Q8N3J9 261 aa16.34■□□□□ 0.21
CSPG5-201ENST00000264723 TMSB15BA0A087X1C1 80 aa16.33■□□□□ 0.21
CSPG5-201ENST00000264723 GZMBP10144 247 aa16.33■□□□□ 0.21
CSPG5-201ENST00000264723 TBR1Q16650 682 aa16.33■□□□□ 0.21
CSPG5-201ENST00000264723 TMEM242Q9NWH2 141 aa16.33■□□□□ 0.21
CSPG5-201ENST00000264723 YPEL1O60688 119 aa16.33■□□□□ 0.2
CSPG5-201ENST00000264723 PYYP10082 97 aa16.33■□□□□ 0.2
CSPG5-201ENST00000264723 BRS3P32247 399 aa16.33■□□□□ 0.2
CSPG5-201ENST00000264723 FOXA3P55318 350 aaPredicted RBP16.33■□□□□ 0.2
CSPG5-201ENST00000264723 Q8NFD4 153 aa16.33■□□□□ 0.2
CSPG5-201ENST00000264723 RNASE6Q93091 150 aaKnown RBP16.33■□□□□ 0.2
CSPG5-201ENST00000264723 YPEL2Q96QA6 119 aa16.33■□□□□ 0.2
CSPG5-201ENST00000264723 ERVK11-1P61568 191 aa16.33■□□□□ 0.2
CSPG5-201ENST00000264723 TNFSF13O75888 250 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms