RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 RPUSD1Q9UJJ7 312 aaKnown RBP11.63□□□□□ -0.55
CDH3-201ENST00000264012 LEPROTL1O95214 131 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 OR9G9P0C7N8 305 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 QRFPP83859 136 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 LINC00469Q8N7U9 141 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 WFIKKN1Q96NZ8 548 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 BDP1A6H8Y1 2624 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 GRIFINA4D1Z8 144 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 ZNF207O43670 478 aaKnown RBP11.63□□□□□ -0.55
CDH3-201ENST00000264012 CBLN1P23435 193 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 Q6ZS92 163 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 IGHV3OR16-8A0A075B7F1 116 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 MBD3L4A6NDZ8 208 aaPredicted RBP11.63□□□□□ -0.55
CDH3-201ENST00000264012 MBD3L3A6NE82 208 aaPredicted RBP11.63□□□□□ -0.55
CDH3-201ENST00000264012 MBD3L5A6NJ08 208 aaPredicted RBP11.63□□□□□ -0.55
CDH3-201ENST00000264012 PEX7O00628 323 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 SRSF9Q13242 221 aaKnown RBP eCLIP11.63□□□□□ -0.55
CDH3-201ENST00000264012 MBD3L2Q8NHZ7 208 aaPredicted RBP11.63□□□□□ -0.55
CDH3-201ENST00000264012 CREBBPQ92793 2442 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 USF3Q68DE3 2245 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 TRBV9A0A0B4J1U6 114 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 TEX45Q8NA69 505 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 VOPP1Q96AW1 172 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 AP5S1Q9NUS5 200 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 IGHV3-66A0A0C4DH42 116 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 LINC00587B1AMM8 73 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 CD24P25063 80 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 DLX1P56177 255 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 HIST1H1AQ02539 215 aaPredicted RBP11.62□□□□□ -0.55
CDH3-201ENST00000264012 IGHV3OR16-12A0A075B7B8 117 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 TGFAP01135 160 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 TCTAP57738 103 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 MYLKQ15746 1914 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 SLC17A3O00476 420 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 SMAD7O15105 426 aaKnown RBP11.62□□□□□ -0.55
CDH3-201ENST00000264012 IGKV3-15P01624 115 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 REG4Q9BYZ8 158 aa11.62□□□□□ -0.55
CDH3-201ENST00000264012 ETV2O00321 342 aaPredicted RBP11.61□□□□□ -0.55
CDH3-201ENST00000264012 NMUP48645 174 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 MAP1LC3AQ9H492 121 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 HGFACQ04756 655 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 ELOVL1Q9BW60 279 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 WFDC1Q9HC57 220 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 ABCA1O95477 2261 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 ANAPC1Q9H1A4 1944 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 A0A0G2JLM5 398 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 SNRPD3P62318 126 aaKnown RBP11.61□□□□□ -0.55
CDH3-201ENST00000264012 PRCDQ00LT1 54 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 PMCHL1Q16048 86 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 ZNF672Q499Z4 452 aaPredicted RBP11.61□□□□□ -0.55
CDH3-201ENST00000264012 TCF24Q7RTU0 167 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 CD177Q8N6Q3 437 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 SDF2L1Q9HCN8 221 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 TICRRQ7Z2Z1 1910 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 TSPOP30536 169 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 HBBP68871 147 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 LYRM7Q5U5X0 104 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 RAX2Q96IS3 184 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 UQCR10Q9UDW1 63 aa11.61□□□□□ -0.55
CDH3-201ENST00000264012 A0A0G2JNJ9 132 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 Q9UFV3 132 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 K7ERU9 68 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 TCF21O43680 179 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 HLA-DRB1P01911 266 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 FOLR2P14207 255 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 CLEC19AQ6UXS0 136 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 ZNF581Q9P0T4 197 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 A0A1B0GV90 55 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 FAM90A9PA6NNJ1 464 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 C5orf24Q7Z6I8 188 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 UBE2CO00762 179 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 TIMM23O14925 209 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 CD69Q07108 199 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 HEPN1Q6WQI6 88 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 DUX5Q96PT3 197 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 IL36BQ9NZH7 164 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 WDR83OSQ9Y284 106 aa11.6□□□□□ -0.55
CDH3-201ENST00000264012 OR4C46A6NHA9 309 aa11.59□□□□□ -0.55
CDH3-201ENST00000264012 WISP1O95388 367 aa11.59□□□□□ -0.55
CDH3-201ENST00000264012 FAM53AQ6NSI3 398 aaPredicted RBP11.59□□□□□ -0.55
CDH3-201ENST00000264012 ZNF600Q6ZNG1 722 aa11.59□□□□□ -0.55
CDH3-201ENST00000264012 ZNF502Q8TBZ5 544 aa11.59□□□□□ -0.55
CDH3-201ENST00000264012 DMRTA2Q96SC8 542 aa11.59□□□□□ -0.55
CDH3-201ENST00000264012 A6NDN8 102 aa11.59□□□□□ -0.55
CDH3-201ENST00000264012 IGKV3-20P01619 116 aa11.59□□□□□ -0.55
CDH3-201ENST00000264012 SRSF3P84103 164 aaKnown RBP11.59□□□□□ -0.55
CDH3-201ENST00000264012 NUP37Q8NFH4 326 aa11.59□□□□□ -0.55
CDH3-201ENST00000264012 TNFRSF14Q92956 283 aa11.59□□□□□ -0.55
CDH3-201ENST00000264012 PSMB2P49721 201 aa11.59□□□□□ -0.55
CDH3-201ENST00000264012 HEATR5AQ86XA9 2040 aa11.58□□□□□ -0.55
CDH3-201ENST00000264012 ZFHX2Q9C0A1 2572 aaPredicted RBP11.58□□□□□ -0.56
CDH3-201ENST00000264012 FOXA3P55318 350 aaPredicted RBP11.58□□□□□ -0.56
CDH3-201ENST00000264012 TAS2R60P59551 318 aa11.58□□□□□ -0.56
CDH3-201ENST00000264012 RRN3P1Q2M238 152 aa11.58□□□□□ -0.56
CDH3-201ENST00000264012 ZNF474Q6S9Z5 364 aaPredicted RBP11.58□□□□□ -0.56
CDH3-201ENST00000264012 TMEM178BH3BS89 294 aa11.58□□□□□ -0.56
CDH3-201ENST00000264012 NPIPB6E9PJ23 425 aa11.58□□□□□ -0.56
CDH3-201ENST00000264012 NUDT3O95989 172 aa11.58□□□□□ -0.56
CDH3-201ENST00000264012 NMSQ5H8A3 153 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms