RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 SLC25A15Q9Y619 301 aa13.47□□□□□ -0.25
ZNF541-201ENST00000263351 TRGV10A0A0A0MS01 117 aa13.47□□□□□ -0.25
ZNF541-201ENST00000263351 IGHG3P01860 377 aa13.47□□□□□ -0.25
ZNF541-201ENST00000263351 LBHQ53QV2 105 aaPredicted RBP13.47□□□□□ -0.25
ZNF541-201ENST00000263351 ZNF474Q6S9Z5 364 aaPredicted RBP13.47□□□□□ -0.25
ZNF541-201ENST00000263351 TEX43Q6ZNM6 134 aa13.47□□□□□ -0.25
ZNF541-201ENST00000263351 TMEM208Q9BTX3 173 aa13.47□□□□□ -0.25
ZNF541-201ENST00000263351 MRPL36Q9P0J6 103 aaKnown RBP13.47□□□□□ -0.25
ZNF541-201ENST00000263351 H3BTX0 84 aa13.46□□□□□ -0.25
ZNF541-201ENST00000263351 NTF3P20783 257 aa13.46□□□□□ -0.25
ZNF541-201ENST00000263351 CHRNB4P30926 498 aa13.46□□□□□ -0.25
ZNF541-201ENST00000263351 GPR6P46095 362 aaPredicted RBP13.46□□□□□ -0.25
ZNF541-201ENST00000263351 AMTP48728 403 aa13.46□□□□□ -0.25
ZNF541-201ENST00000263351 TMEM136Q6ZRR5 245 aa13.46□□□□□ -0.25
ZNF541-201ENST00000263351 Q71RC1 249 aaPredicted RBP13.46□□□□□ -0.25
ZNF541-201ENST00000263351 SSBP4Q9BWG4 385 aaPredicted RBP13.46□□□□□ -0.25
ZNF541-201ENST00000263351 APC2O95996 2303 aa13.46□□□□□ -0.25
ZNF541-201ENST00000263351 TRGV8A0A0C4DH27 118 aa13.46□□□□□ -0.26
ZNF541-201ENST00000263351 TEX50A0A1B0GTY4 177 aa13.46□□□□□ -0.26
ZNF541-201ENST00000263351 REG1AP05451 166 aa13.46□□□□□ -0.26
ZNF541-201ENST00000263351 ZNF883P0CG24 379 aa13.46□□□□□ -0.26
ZNF541-201ENST00000263351 SAA1P0DJI8 122 aaPredicted RBP13.46□□□□□ -0.26
ZNF541-201ENST00000263351 CCL3L1P16619 93 aa13.46□□□□□ -0.26
ZNF541-201ENST00000263351 SLAQ13239 276 aa13.46□□□□□ -0.26
ZNF541-201ENST00000263351 PRR27Q6MZM9 219 aa13.46□□□□□ -0.26
ZNF541-201ENST00000263351 C11orf52Q96A22 123 aa13.46□□□□□ -0.26
ZNF541-201ENST00000263351 VAMP8Q9BV40 100 aa13.46□□□□□ -0.26
ZNF541-201ENST00000263351 FOXA2Q9Y261 457 aaPredicted RBP13.46□□□□□ -0.26
ZNF541-201ENST00000263351 ZGRF1Q86YA3 2104 aa13.46□□□□□ -0.26
ZNF541-201ENST00000263351 IGHV3-21A0A0B4J1V1 117 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 KBTBD11-OT1A0A1B0GTJ5 212 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 SPAARA0A1B0GVQ0 90 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 CORTO00230 105 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 BMPR1BO00238 502 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 GNG5P63218 68 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 PLEKHA3Q9HB20 300 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 PROCRQ9UNN8 238 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 A0A1W2PS18 150 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 FCN3O75636 299 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 CCL8P80075 99 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 NRN1Q9NPD7 142 aa13.45□□□□□ -0.26
ZNF541-201ENST00000263351 PRR33A8MZF0 331 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 GPX1P07203 203 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 MMDQ15546 238 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 DEFB109BQ30KR1 87 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 GDF5OSQ5U4N7 250 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 PLSCR4Q9NRQ2 329 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 ZFHX2Q9C0A1 2572 aaPredicted RBP13.44□□□□□ -0.26
ZNF541-201ENST00000263351 DIRC3C9JPN6 131 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 ZNF253O75346 499 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 AREGP15514 252 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 SIGLECL1Q8N7X8 197 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 ZNF439Q8NDP4 499 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 GAFA1Q96PS6 74 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 SFXN3Q9BWM7 321 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 MRPL20Q9BYC9 149 aaKnown RBP13.44□□□□□ -0.26
ZNF541-201ENST00000263351 ZNF355PQ9NSJ1 428 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 SLC35D1Q9NTN3 355 aa13.44□□□□□ -0.26
ZNF541-201ENST00000263351 A8MXE2 369 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 C9JCJ5 164 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 LHBP01229 141 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 BRS3P32247 399 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 FAM27E3Q08E93 113 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 PLA2G2CQ5R387 149 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 CDC42EP3Q9UKI2 254 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 RPH3ALQ9UNE2 315 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 FAM90A9PA6NNJ1 464 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 M0QZ24 198 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 KLF3P57682 345 aaPredicted RBP13.43□□□□□ -0.26
ZNF541-201ENST00000263351 IBA57Q5T440 356 aaKnown RBP13.43□□□□□ -0.26
ZNF541-201ENST00000263351 MIEN1Q9BRT3 115 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 LPAR2Q9HBW0 351 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 TPSG1Q9NRR2 321 aa13.43□□□□□ -0.26
ZNF541-201ENST00000263351 NBASA2RRP1 2371 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 RNASE2P10153 161 aaKnown RBP13.42□□□□□ -0.26
ZNF541-201ENST00000263351 CX3CL1P78423 397 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 CR1LQ2VPA4 569 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 TRAT1Q6PIZ9 186 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 RITA1Q96K30 269 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 SLC25A2Q9BXI2 301 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 FNDC4Q9H6D8 234 aaPredicted RBP13.42□□□□□ -0.26
ZNF541-201ENST00000263351 IL19Q9UHD0 177 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 SH2D7A6NKC9 451 aaPredicted RBP13.42□□□□□ -0.26
ZNF541-201ENST00000263351 UPK2O00526 184 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 FOSL1P15407 271 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 RAB31Q13636 194 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 NIT1Q86X76 327 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 KIR3DL3Q8N743 410 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 ASCL2Q99929 193 aa13.42□□□□□ -0.26
ZNF541-201ENST00000263351 K7EM74 188 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 UBE2L3P68036 154 aaKnown RBP13.41□□□□□ -0.26
ZNF541-201ENST00000263351 PRCDQ00LT1 54 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 PMCHL1Q16048 86 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 ZNF841Q6ZN19 808 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 FAM167A-AS1Q96KT0 104 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 IGF2BP2-AS1Q96M15 143 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 TECRQ9NZ01 308 aaKnown RBP13.41□□□□□ -0.26
ZNF541-201ENST00000263351 IGHV3-72A0A0B4J1Y9 119 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 VWC2LB2RUY7 222 aa13.41□□□□□ -0.26
ZNF541-201ENST00000263351 IGHV1-46P01743 117 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 225.9 ms