RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 MMD2Q8IY49 270 aa18.49■□□□□ 0.55
MCF2L-201ENST00000261963 DEFB108BQ8NET1 73 aa18.49■□□□□ 0.55
MCF2L-201ENST00000261963 TET2Q6N021 2002 aaPredicted RBP18.48■□□□□ 0.55
MCF2L-201ENST00000261963 LOC105371242A0A075B767 164 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 A0A1W2PS18 150 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 DPRXA6NFQ7 191 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 KLK10O43240 276 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 OR4S2Q8NH73 311 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 TCF19Q9Y242 345 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 MRPS16Q9Y3D3 137 aaKnown RBP18.48■□□□□ 0.55
MCF2L-201ENST00000261963 GVINP1Q7Z2Y8 2422 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 PRRX1P54821 245 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 TREML4Q6UXN2 200 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 Q6ZVH6 145 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 ABHD12Q8N2K0 398 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 ZNF439Q8NDP4 499 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 CCL13Q99616 98 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 SLC35D1Q9NTN3 355 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 NAT8BQ9UHF3 227 aa18.48■□□□□ 0.55
MCF2L-201ENST00000261963 TSPOP30536 169 aa18.47■□□□□ 0.55
MCF2L-201ENST00000261963 TRGV10A0A0A0MS01 117 aa18.47■□□□□ 0.55
MCF2L-201ENST00000261963 CXorf1O96002 111 aa18.47■□□□□ 0.55
MCF2L-201ENST00000261963 MT-ND6P03923 174 aa18.47■□□□□ 0.55
MCF2L-201ENST00000261963 C3orf79P0CE67 100 aa18.47■□□□□ 0.55
MCF2L-201ENST00000261963 TMPRSS3P57727 454 aa18.47■□□□□ 0.55
MCF2L-201ENST00000261963 SELENOVP59797 346 aa18.47■□□□□ 0.55
MCF2L-201ENST00000261963 RPL19P84098 196 aaKnown RBP18.47■□□□□ 0.55
MCF2L-201ENST00000261963 FAM216BQ8N7L0 139 aa18.47■□□□□ 0.55
MCF2L-201ENST00000261963 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.47■□□□□ 0.55
MCF2L-201ENST00000261963 ST6GALNAC3Q8NDV1 305 aa18.47■□□□□ 0.55
MCF2L-201ENST00000261963 WNT10AQ9GZT5 417 aa18.47■□□□□ 0.55
MCF2L-201ENST00000261963 C15orf61A6NNL5 157 aa18.46■□□□□ 0.55
MCF2L-201ENST00000261963 REG1AP05451 166 aa18.46■□□□□ 0.55
MCF2L-201ENST00000261963 RNF151Q2KHN1 245 aa18.46■□□□□ 0.55
MCF2L-201ENST00000261963 WDR73Q6P4I2 378 aa18.46■□□□□ 0.55
MCF2L-201ENST00000261963 OR8I2Q8N0Y5 310 aa18.46■□□□□ 0.55
MCF2L-201ENST00000261963 MS4A5Q9H3V2 200 aa18.46■□□□□ 0.55
MCF2L-201ENST00000261963 GSX1Q9H4S2 264 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-201ENST00000261963 STAG3L2P0CL84 134 aa18.45■□□□□ 0.54
MCF2L-201ENST00000261963 STAG3L3P0CL85 134 aa18.45■□□□□ 0.54
MCF2L-201ENST00000261963 ZNF788Q6ZQV5 615 aa18.45■□□□□ 0.54
MCF2L-201ENST00000261963 OR4C5Q8NGB2 326 aa18.45■□□□□ 0.54
MCF2L-201ENST00000261963 MGST2Q99735 147 aa18.45■□□□□ 0.54
MCF2L-201ENST00000261963 RAB9BQ9NP90 201 aa18.45■□□□□ 0.54
MCF2L-201ENST00000261963 ZNF324O75467 553 aaPredicted RBP18.45■□□□□ 0.54
MCF2L-201ENST00000261963 FBLN7Q53RD9 439 aa18.45■□□□□ 0.54
MCF2L-201ENST00000261963 C1orf159Q96HA4 380 aa18.45■□□□□ 0.54
MCF2L-201ENST00000261963 RCHY1Q96PM5 261 aa18.45■□□□□ 0.54
MCF2L-201ENST00000261963 ATMQ13315 3056 aa18.45■□□□□ 0.54
MCF2L-201ENST00000261963 TRGV8A0A0C4DH27 118 aa18.44■□□□□ 0.54
MCF2L-201ENST00000261963 IGHV2-70DA0A0C4DH43 119 aa18.44■□□□□ 0.54
MCF2L-201ENST00000261963 MPDU1O75352 247 aa18.44■□□□□ 0.54
MCF2L-201ENST00000261963 RPL31P62899 125 aaKnown RBP18.44■□□□□ 0.54
MCF2L-201ENST00000261963 OR4A47Q6IF82 309 aa18.44■□□□□ 0.54
MCF2L-201ENST00000261963 PRSS33Q8NF86 280 aa18.44■□□□□ 0.54
MCF2L-201ENST00000261963 SNRNP40Q96DI7 357 aaKnown RBP18.44■□□□□ 0.54
MCF2L-201ENST00000261963 LINC00574Q9H8X3 128 aa18.44■□□□□ 0.54
MCF2L-201ENST00000261963 LY96Q9Y6Y9 160 aa18.44■□□□□ 0.54
MCF2L-201ENST00000261963 OPRK1P41145 380 aa18.44■□□□□ 0.54
MCF2L-201ENST00000261963 YTHDF2Q9Y5A9 579 aaKnown RBP18.44■□□□□ 0.54
MCF2L-201ENST00000261963 CUL9Q8IWT3 2517 aa18.44■□□□□ 0.54
MCF2L-201ENST00000261963 A0A1W2PN81 502 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 C9JCJ5 164 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 KIAA1644Q3SXP7 199 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 NUP37Q8NFH4 326 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 OR5B3Q8NH48 314 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 GGTLC1Q9BX51 225 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 TMEM14BQ9NUH8 114 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 IDI2-AS1Q9NZ38 188 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 V9GYV3 84 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 RAI1Q7Z5J4 1906 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-201ENST00000261963 C19orf35Q6ZS72 473 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 NIT1Q86X76 327 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 BORCS7Q96B45 105 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 EAF1Q96JC9 268 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-201ENST00000261963 CDC42EP3Q9UKI2 254 aa18.43■□□□□ 0.54
MCF2L-201ENST00000261963 FOXA2Q9Y261 457 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-201ENST00000261963 TANC2Q9HCD6 1990 aa18.42■□□□□ 0.54
MCF2L-201ENST00000261963 IGHV2-26A0A0B4J1V2 119 aa18.42■□□□□ 0.54
MCF2L-201ENST00000261963 TNFSF4P23510 183 aa18.42■□□□□ 0.54
MCF2L-201ENST00000261963 ROS1P08922 2347 aa18.42■□□□□ 0.54
MCF2L-201ENST00000261963 A0A0G2JNJ9 132 aa18.42■□□□□ 0.54
MCF2L-201ENST00000261963 COX19Q49B96 90 aa18.42■□□□□ 0.54
MCF2L-201ENST00000261963 TEX36Q5VZQ5 186 aa18.42■□□□□ 0.54
MCF2L-201ENST00000261963 MIC13Q5XKP0 118 aa18.42■□□□□ 0.54
MCF2L-201ENST00000261963 DOLPP1Q86YN1 238 aa18.42■□□□□ 0.54
MCF2L-201ENST00000261963 UHRF2Q96PU4 802 aa18.42■□□□□ 0.54
MCF2L-201ENST00000261963 Q9UFV3 132 aa18.42■□□□□ 0.54
MCF2L-201ENST00000261963 LSM4Q9Y4Z0 139 aaKnown RBP18.42■□□□□ 0.54
MCF2L-201ENST00000261963 MYOD1P15172 320 aa18.41■□□□□ 0.54
MCF2L-201ENST00000261963 ACACAQ13085 2346 aa18.41■□□□□ 0.54
MCF2L-201ENST00000261963 TMEM136Q6ZRR5 245 aa18.41■□□□□ 0.54
MCF2L-201ENST00000261963 ATOH7Q8N100 152 aa18.41■□□□□ 0.54
MCF2L-201ENST00000261963 CORO2AQ92828 525 aa18.41■□□□□ 0.54
MCF2L-201ENST00000261963 SPINK4O60575 86 aa18.41■□□□□ 0.54
MCF2L-201ENST00000261963 HSPE1P61604 102 aaKnown RBP18.41■□□□□ 0.54
MCF2L-201ENST00000261963 CX3CL1P78423 397 aa18.41■□□□□ 0.54
MCF2L-201ENST00000261963 PMCHL1Q16048 86 aa18.41■□□□□ 0.54
MCF2L-201ENST00000261963 ZNRD1Q9P1U0 126 aa18.41■□□□□ 0.54
MCF2L-201ENST00000261963 IGHV1-69-2A0A0G2JMI3 117 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms