RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 TBC1D24Q9ULP9 559 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 TP53TG1Q9Y2A0 90 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 C15orf61A6NNL5 157 aa15.66■□□□□ 0.1
NEDD8-201ENST00000250495 BAK1Q16611 211 aa15.66■□□□□ 0.1
NEDD8-201ENST00000250495 WFDC3Q8IUB2 231 aa15.66■□□□□ 0.1
NEDD8-201ENST00000250495 SCPEP1Q9HB40 452 aa15.66■□□□□ 0.1
NEDD8-201ENST00000250495 EXTL2Q9UBQ6 330 aa15.66■□□□□ 0.1
NEDD8-201ENST00000250495 OR4C46A6NHA9 309 aa15.65■□□□□ 0.1
NEDD8-201ENST00000250495 C15orf62A8K5M9 175 aa15.65■□□□□ 0.1
NEDD8-201ENST00000250495 F8W735 103 aaPredicted RBP15.65■□□□□ 0.1
NEDD8-201ENST00000250495 SPRY2O43597 315 aa15.65■□□□□ 0.1
NEDD8-201ENST00000250495 EIF4EP06730 217 aaKnown RBP15.65■□□□□ 0.1
NEDD8-201ENST00000250495 CTSGP08311 255 aa15.65■□□□□ 0.1
NEDD8-201ENST00000250495 BMI1P35226 326 aa15.65■□□□□ 0.1
NEDD8-201ENST00000250495 ADMP35318 185 aa15.65■□□□□ 0.1
NEDD8-201ENST00000250495 IL18Q14116 193 aa15.65■□□□□ 0.1
NEDD8-201ENST00000250495 H2BFWTQ7Z2G1 175 aa15.65■□□□□ 0.1
NEDD8-201ENST00000250495 TBC1D26Q86UD7 250 aa15.65■□□□□ 0.1
NEDD8-201ENST00000250495 OR4A16Q8NH70 328 aa15.65■□□□□ 0.1
NEDD8-201ENST00000250495 KIR2DL5BA0A0G2JN68 375 aa15.64■□□□□ 0.09
NEDD8-201ENST00000250495 KIR2DL5BA0A0G2JPC4 375 aa15.64■□□□□ 0.09
NEDD8-201ENST00000250495 DBX1A6NMT0 343 aa15.64■□□□□ 0.09
NEDD8-201ENST00000250495 NUPL2O15504 423 aaKnown RBP15.64■□□□□ 0.09
NEDD8-201ENST00000250495 UCP3P55916 312 aa15.64■□□□□ 0.09
NEDD8-201ENST00000250495 RELQ04864 619 aaPredicted RBP15.64■□□□□ 0.09
NEDD8-201ENST00000250495 TRIQKQ629K1 86 aa15.64■□□□□ 0.09
NEDD8-201ENST00000250495 KIR2DL5AQ8N109 375 aa15.64■□□□□ 0.09
NEDD8-201ENST00000250495 STPG3Q8N7X2 389 aa15.64■□□□□ 0.09
NEDD8-201ENST00000250495 KIR2DL5BQ8NHK3 375 aa15.64■□□□□ 0.09
NEDD8-201ENST00000250495 SEC22AQ96IW7 307 aa15.64■□□□□ 0.09
NEDD8-201ENST00000250495 TXN2Q99757 166 aa15.64■□□□□ 0.09
NEDD8-201ENST00000250495 IGHV3OR16-8A0A075B7F1 116 aa15.63■□□□□ 0.09
NEDD8-201ENST00000250495 ZNF207O43670 478 aaKnown RBP15.63■□□□□ 0.09
NEDD8-201ENST00000250495 CTSDP07339 412 aaPredicted RBP15.63■□□□□ 0.09
NEDD8-201ENST00000250495 MFAP4P55083 255 aa15.63■□□□□ 0.09
NEDD8-201ENST00000250495 TNFRSF9Q07011 255 aa15.63■□□□□ 0.09
NEDD8-201ENST00000250495 SMPXQ9UHP9 88 aa15.63■□□□□ 0.09
NEDD8-201ENST00000250495 FCGR2BP31994 310 aaPredicted RBP15.62■□□□□ 0.09
NEDD8-201ENST00000250495 RCVRNP35243 200 aa15.62■□□□□ 0.09
NEDD8-201ENST00000250495 CMC4P56277 68 aaPredicted RBP15.62■□□□□ 0.09
NEDD8-201ENST00000250495 ODF3L2Q3SX64 289 aa15.62■□□□□ 0.09
NEDD8-201ENST00000250495 MISP3Q96FF7 219 aa15.62■□□□□ 0.09
NEDD8-201ENST00000250495 GALNT14Q96FL9 552 aa15.62■□□□□ 0.09
NEDD8-201ENST00000250495 A0A0J9YWU9 116 aa15.61■□□□□ 0.09
NEDD8-201ENST00000250495 I3L2K1 104 aa15.61■□□□□ 0.09
NEDD8-201ENST00000250495 CTDSPLO15194 276 aa15.61■□□□□ 0.09
NEDD8-201ENST00000250495 YIF1AO95070 293 aa15.61■□□□□ 0.09
NEDD8-201ENST00000250495 HSPE1P61604 102 aaKnown RBP15.61■□□□□ 0.09
NEDD8-201ENST00000250495 ERHP84090 104 aaKnown RBP15.61■□□□□ 0.09
NEDD8-201ENST00000250495 PRCDQ00LT1 54 aa15.61■□□□□ 0.09
NEDD8-201ENST00000250495 DEFB135Q30KP9 77 aa15.61■□□□□ 0.09
NEDD8-201ENST00000250495 LYG2Q86SG7 212 aa15.61■□□□□ 0.09
NEDD8-201ENST00000250495 TMEM116Q8NCL8 245 aa15.61■□□□□ 0.09
NEDD8-201ENST00000250495 CHAC2Q8WUX2 184 aa15.61■□□□□ 0.09
NEDD8-201ENST00000250495 RHPN1-AS1Q9BWJ2 59 aa15.61■□□□□ 0.09
NEDD8-201ENST00000250495 EPPK1P58107 5090 aaKnown RBP15.6■□□□□ 0.09
NEDD8-201ENST00000250495 IGHV7-4-1A0A0J9YVY3 117 aa15.6■□□□□ 0.09
NEDD8-201ENST00000250495 CXorf65A6NEN9 183 aa15.6■□□□□ 0.09
NEDD8-201ENST00000250495 IGKV1-39P01597 117 aa15.6■□□□□ 0.09
NEDD8-201ENST00000250495 IGKV1D-39P04432 117 aa15.6■□□□□ 0.09
NEDD8-201ENST00000250495 MZT2BQ6NZ67 158 aa15.6■□□□□ 0.09
NEDD8-201ENST00000250495 ZNF114Q8NC26 417 aa15.6■□□□□ 0.09
NEDD8-201ENST00000250495 C15orf40Q8WUR7 153 aa15.6■□□□□ 0.09
NEDD8-201ENST00000250495 RNF183Q96D59 192 aa15.6■□□□□ 0.09
NEDD8-201ENST00000250495 OR10C1Q96KK4 312 aa15.6■□□□□ 0.09
NEDD8-201ENST00000250495 RNF2Q99496 336 aa15.6■□□□□ 0.09
NEDD8-201ENST00000250495 HYDINQ4G0P3 5121 aa15.59■□□□□ 0.09
NEDD8-201ENST00000250495 TRAV14DV4A0A0A6YYC5 116 aa15.59■□□□□ 0.09
NEDD8-201ENST00000250495 CHEK1O14757 476 aa15.59■□□□□ 0.09
NEDD8-201ENST00000250495 MT-CO2P00403 227 aa15.59■□□□□ 0.09
NEDD8-201ENST00000250495 RPL35AP18077 110 aaKnown RBP15.59■□□□□ 0.09
NEDD8-201ENST00000250495 PMS2P11Q13670 270 aa15.59■□□□□ 0.09
NEDD8-201ENST00000250495 MRGPRFQ96AM1 343 aa15.59■□□□□ 0.09
NEDD8-201ENST00000250495 PLECQ15149 4684 aaKnown RBP15.58■□□□□ 0.09
NEDD8-201ENST00000250495 NUPR2A6NF83 97 aa15.58■□□□□ 0.08
NEDD8-201ENST00000250495 GSTZ1O43708 216 aaPredicted RBP15.58■□□□□ 0.08
NEDD8-201ENST00000250495 GNG7O60262 68 aa15.58■□□□□ 0.08
NEDD8-201ENST00000250495 ATF4P18848 351 aaPredicted RBP15.58■□□□□ 0.08
NEDD8-201ENST00000250495 NRARPQ7Z6K4 114 aa15.58■□□□□ 0.08
NEDD8-201ENST00000250495 TMEM217Q8N7C4 229 aa15.58■□□□□ 0.08
NEDD8-201ENST00000250495 TRIM63Q969Q1 353 aa15.58■□□□□ 0.08
NEDD8-201ENST00000250495 ZNF486Q96H40 463 aaPredicted RBP15.58■□□□□ 0.08
NEDD8-201ENST00000250495 MAP6D1Q9H9H5 199 aa15.58■□□□□ 0.08
NEDD8-201ENST00000250495 PLA2G10O15496 165 aa15.57■□□□□ 0.08
NEDD8-201ENST00000250495 INPP1P49441 399 aa15.57■□□□□ 0.08
NEDD8-201ENST00000250495 MRPS10P82664 201 aaKnown RBP15.57■□□□□ 0.08
NEDD8-201ENST00000250495 PINX1Q96BK5 328 aaKnown RBP15.57■□□□□ 0.08
NEDD8-201ENST00000250495 M0QYG6 137 aa15.56■□□□□ 0.08
NEDD8-201ENST00000250495 ATG12O94817 140 aa15.56■□□□□ 0.08
NEDD8-201ENST00000250495 CD5P06127 495 aa15.56■□□□□ 0.08
NEDD8-201ENST00000250495 HNRNPCP07910 306 aaKnown RBP eCLIP15.56■□□□□ 0.082e-6■□□□□ 8.9
NEDD8-201ENST00000250495 PGAM2P15259 253 aa15.56■□□□□ 0.08
NEDD8-201ENST00000250495 NPBWR1P48145 328 aa15.56■□□□□ 0.08
NEDD8-201ENST00000250495 RND3P61587 244 aa15.56■□□□□ 0.08
NEDD8-201ENST00000250495 PAFAH1B2P68402 229 aa15.56■□□□□ 0.08
NEDD8-201ENST00000250495 APRG1Q8IVJ8 170 aa15.56■□□□□ 0.08
NEDD8-201ENST00000250495 LINC00476Q8WZB0 136 aa15.56■□□□□ 0.08
NEDD8-201ENST00000250495 ZNF414Q96IQ9 312 aa15.56■□□□□ 0.08
NEDD8-201ENST00000250495 C7orf50Q9BRJ6 194 aaKnown RBP15.56■□□□□ 0.08
NEDD8-201ENST00000250495 GINS3Q9BRX5 216 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms