RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 C9JCJ5 164 aa12.55□□□□□ -0.4
PCDHB8-201ENST00000239444 AMTP48728 403 aa12.55□□□□□ -0.4
PCDHB8-201ENST00000239444 SSBP2P81877 361 aaPredicted RBP12.55□□□□□ -0.4
PCDHB8-201ENST00000239444 RAB31Q13636 194 aa12.55□□□□□ -0.4
PCDHB8-201ENST00000239444 ATOH7Q8N100 152 aa12.55□□□□□ -0.4
PCDHB8-201ENST00000239444 FAM216BQ8N7L0 139 aa12.55□□□□□ -0.4
PCDHB8-201ENST00000239444 SLC45A2Q9UMX9 530 aa12.55□□□□□ -0.4
PCDHB8-201ENST00000239444 FOXA2Q9Y261 457 aaPredicted RBP12.55□□□□□ -0.4
PCDHB8-201ENST00000239444 TRAV17A0A0B4J275 112 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 MT-CO2P00403 227 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 SRIP30626 198 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 RANP62826 216 aaKnown RBP12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 SIGLECL1Q8N7X8 197 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 MIEN1Q9BRT3 115 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 PLEKHA3Q9HB20 300 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 ZNF71Q9NQZ8 489 aaPredicted RBP12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 TACC2O95359 2948 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 GPX1P07203 203 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 AREGP15514 252 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 TMEM136Q6ZRR5 245 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 BHLHA15Q7RTS1 189 aaPredicted RBP12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 Q8N976 141 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 STARD4Q96DR4 205 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 CCL13Q99616 98 aa12.54□□□□□ -0.4
PCDHB8-201ENST00000239444 IGLV2-8P01709 118 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 CGB3P0DN86 165 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 CGB7P0DN87 165 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 TMEM183BQ1AE95 376 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 PPP1R35Q8TAP8 253 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 RNASE8Q8TDE3 154 aaKnown RBP12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 SGK494Q96LW2 274 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 SFXN3Q9BWM7 321 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 WNT10AQ9GZT5 417 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 CSMD1Q96PZ7 3565 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 NBASA2RRP1 2371 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 DIRC3C9JPN6 131 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 ZNF253O75346 499 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 REG1BP48304 166 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 OR2T6Q8NHC8 308 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 C20orf144Q9BQM9 153 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 DNAJC4Q9NNZ3 241 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 NRN1Q9NPD7 142 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 DKK4Q9UBT3 224 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 IL19Q9UHD0 177 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 SVEP1Q4LDE5 3571 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 TRAV34A0A0B4J273 112 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 KBTBD11-OT1A0A1B0GTJ5 212 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 E7EUB6 86 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 ESDP10768 282 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 NTF3P20783 257 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 CR1LQ2VPA4 569 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 MAJINQ3KP22 176 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 SARAFQ96BY9 339 aa12.53□□□□□ -0.4
PCDHB8-201ENST00000239444 DYSFO75923 2080 aa12.52□□□□□ -0.4
PCDHB8-201ENST00000239444 A0A1W2PS18 150 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 BMPR1BO00238 502 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 PYYP10082 97 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 CX3CL1P78423 397 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 TIGITQ495A1 244 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 SEM1Q6ZVN7 128 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 C1orf162Q8NEQ5 155 aaPredicted RBP12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 PROCRQ9UNN8 238 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 SLC25A15Q9Y619 301 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 TPRP12270 2363 aaKnown RBP12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 PRR33A8MZF0 331 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 PLAUP00749 431 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 CT45A6P0DMU7 189 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 CT45A5P0DMU8 189 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 CT45A7P0DMV0 189 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 Q0VG73 95 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 IBA57Q5T440 356 aaKnown RBP12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 C22orf34Q6ZV56 151 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 C11orf42Q8N5U0 333 aa12.52□□□□□ -0.41
PCDHB8-201ENST00000239444 MUC6Q6W4X9 2439 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 TEX50A0A1B0GTY4 177 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 KIR2DS2P43631 304 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 SLAQ13239 276 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 GNB1LQ9BYB4 327 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 PLSCR4Q9NRQ2 329 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 SLC35D1Q9NTN3 355 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 APC2O95996 2303 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 SAA1P0DJI8 122 aaPredicted RBP12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 RAB7AP51149 207 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 MMDQ15546 238 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 DEFB109BQ30KR1 87 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 C10orf55Q5SWW7 151 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 ETFRF1Q6IPR1 90 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 ZCCHC24Q8N2G6 241 aaKnown RBP12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 TECRQ9NZ01 308 aaKnown RBP12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 CDC42EP3Q9UKI2 254 aa12.51□□□□□ -0.41
PCDHB8-201ENST00000239444 RBX1P62877 108 aa12.5□□□□□ -0.41
PCDHB8-201ENST00000239444 LCN12Q6JVE5 192 aa12.5□□□□□ -0.41
PCDHB8-201ENST00000239444 PRR27Q6MZM9 219 aa12.5□□□□□ -0.41
PCDHB8-201ENST00000239444 LHBP01229 141 aa12.5□□□□□ -0.41
PCDHB8-201ENST00000239444 CHRNB4P30926 498 aa12.5□□□□□ -0.41
PCDHB8-201ENST00000239444 KLF3P57682 345 aaPredicted RBP12.5□□□□□ -0.41
PCDHB8-201ENST00000239444 PRCDQ00LT1 54 aa12.5□□□□□ -0.41
PCDHB8-201ENST00000239444 SPATA45Q537H7 98 aa12.5□□□□□ -0.41
PCDHB8-201ENST00000239444 SAPCD1Q5SSQ6 148 aa12.5□□□□□ -0.41
PCDHB8-201ENST00000239444 ZNF439Q8NDP4 499 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms