RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 PXMP4Q9Y6I8 212 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 S4R3C0 116 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 IGHV2-70P01814 119 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 OPRK1P41145 380 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 THBS3P49746 956 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 HSPE1P61604 102 aaKnown RBP6.99□□□□□ -1.29
VPS4B-201ENST00000238497 SERF2P84101 59 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 SCGB2A2Q13296 93 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 SPATA31B1PQ5VZV4 182 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 TCF23Q7RTU1 214 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 MISP3Q96FF7 219 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 BIN3Q9NQY0 253 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 GAB2Q9UQC2 676 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 A0A1W2PPQ1 181 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 ZNF729A6NN14 1252 aaPredicted RBP6.99□□□□□ -1.29
VPS4B-201ENST00000238497 COLCA2A8K830 154 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 SPINK4O60575 86 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 OR5G3P0C626 314 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 ATP5G3P48201 142 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 RAB31Q13636 194 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 TNXAQ16473 311 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 KRTAP24-1Q3LI83 254 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 C19orf24Q9BVV8 132 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 SSBP3Q9BWW4 388 aaPredicted RBP6.99□□□□□ -1.29
VPS4B-201ENST00000238497 TNFRSF19Q9NS68 423 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 C11orf94C9JXX5 98 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 FAM90A26D6RGX4 464 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 H3BTX0 84 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 NDUFB4O95168 129 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 RAB5AP20339 215 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 FABP9Q0Z7S8 132 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 OR2T6Q8NHC8 308 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 NEIL1Q96FI4 390 aaPredicted RBP6.98□□□□□ -1.29
VPS4B-201ENST00000238497 SGK494Q96LW2 274 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 SSX3Q99909 188 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 PCGF1Q9BSM1 259 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 VAX2Q9UIW0 290 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 BTBD17A6NE02 478 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 F2RL2O00254 374 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 CNIH1O95406 144 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 ARL14EPLP0DKL9 152 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 MEF2BQ02080 365 aaPredicted RBP6.98□□□□□ -1.29
VPS4B-201ENST00000238497 RNF212Q495C1 297 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 KHDC3LQ587J8 217 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 ASPHD1Q5U4P2 390 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 SLC35E3Q7Z769 313 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 KIR3DL3Q8N743 410 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 RITA1Q96K30 269 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 DERL1Q9BUN8 251 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 MIOXQ9UGB7 285 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 INSIG2Q9Y5U4 225 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 LOC102723971A0A1B0GUV8 181 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 KBTBD11O94819 623 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 CNTFRP26992 372 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 OR10J1P30954 320 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 CFHR2P36980 270 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 TMEM155Q4W5P6 130 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 TREML4Q6UXN2 200 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 SLC16A13Q7RTY0 426 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 OR9G1Q8NH87 305 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 SEPSECSQ9HD40 501 aaKnown RBP6.98□□□□□ -1.29
VPS4B-201ENST00000238497 TPSG1Q9NRR2 321 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 LINC00312Q9Y6C7 94 aa6.98□□□□□ -1.29
VPS4B-201ENST00000238497 CTXND1A0A1B0GTU2 59 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 E7EUB6 86 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 YIF1AO95070 293 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 FLI1Q01543 452 aaPredicted RBP6.97□□□□□ -1.29
VPS4B-201ENST00000238497 ATP6V1FQ16864 119 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 PNKDQ8N490 385 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 TEX29Q8N6K0 151 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 SCRT1Q9BWW7 348 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 CUBNO60494 3623 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 PPIAL4CA0A0B4J2A2 164 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 MT-ND4LP03901 98 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 PPIAL4GP0DN37 164 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 ORM2P19652 201 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 GATA4P43694 442 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 FAM3BP58499 235 aaPredicted RBP6.97□□□□□ -1.29
VPS4B-201ENST00000238497 ERHP84090 104 aaKnown RBP6.97□□□□□ -1.29
VPS4B-201ENST00000238497 ZNF506Q5JVG8 444 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 TEPPQ6URK8 271 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 LYPD6BQ8NI32 183 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 FRZBQ92765 325 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 RPEQ96AT9 228 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 UHRF2Q96PU4 802 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 FAM103A1Q9BTL3 118 aaKnown RBP6.97□□□□□ -1.29
VPS4B-201ENST00000238497 NPVFQ9HCQ7 196 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 COA4Q9NYJ1 87 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 MGAM2Q2M2H8 2515 aa6.97□□□□□ -1.29
VPS4B-201ENST00000238497 C15orf61A6NNL5 157 aa6.96□□□□□ -1.29
VPS4B-201ENST00000238497 TRGC2P03986 189 aa6.96□□□□□ -1.29
VPS4B-201ENST00000238497 S100A9P06702 114 aaKnown RBP6.96□□□□□ -1.29
VPS4B-201ENST00000238497 CXCL1P09341 107 aa6.96□□□□□ -1.29
VPS4B-201ENST00000238497 SSTP61278 116 aa6.96□□□□□ -1.29
VPS4B-201ENST00000238497 RPL8P62917 257 aaKnown RBP6.96□□□□□ -1.29
VPS4B-201ENST00000238497 KLRD1Q13241 179 aa6.96□□□□□ -1.29
VPS4B-201ENST00000238497 PSG5Q15238 335 aa6.96□□□□□ -1.29
VPS4B-201ENST00000238497 TMEM241Q24JQ0 296 aa6.96□□□□□ -1.29
VPS4B-201ENST00000238497 PARLQ9H300 379 aa6.96□□□□□ -1.29
VPS4B-201ENST00000238497 TET2Q6N021 2002 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms