RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 AKR1C1Q04828 323 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 ZNF726P1Q15940 193 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 FFAR4Q5NUL3 377 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 C19orf35Q6ZS72 473 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 TMEM144Q7Z5S9 345 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 OR1P1Q8NH06 330 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 GGTLC1Q9BX51 225 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 SOX21Q9Y651 276 aaPredicted RBP12.07□□□□□ -0.48
HDHD3-201ENST00000238379 OPRK1P41145 380 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 SRSF3P84103 164 aaKnown RBP12.07□□□□□ -0.48
HDHD3-201ENST00000238379 UQCC3Q6UW78 93 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 SLC16A13Q7RTY0 426 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 RPP25LQ8N5L8 163 aaKnown RBP12.07□□□□□ -0.48
HDHD3-201ENST00000238379 F11RQ9Y624 299 aaKnown RBP12.07□□□□□ -0.48
HDHD3-201ENST00000238379 IGKV1OR2-108A0A075B7D4 117 aa12.06□□□□□ -0.48
HDHD3-201ENST00000238379 NDPQ00604 133 aa12.06□□□□□ -0.48
HDHD3-201ENST00000238379 OR2T6Q8NHC8 308 aa12.06□□□□□ -0.48
HDHD3-201ENST00000238379 SFT2D1Q8WV19 159 aa12.06□□□□□ -0.48
HDHD3-201ENST00000238379 RCC1LQ96I51 464 aaKnown RBP12.06□□□□□ -0.48
HDHD3-201ENST00000238379 FAM103A1Q9BTL3 118 aaKnown RBP12.06□□□□□ -0.48
HDHD3-201ENST00000238379 DMRT1Q9Y5R6 373 aa12.06□□□□□ -0.48
HDHD3-201ENST00000238379 PDZD2O15018 2839 aa12.06□□□□□ -0.48
HDHD3-201ENST00000238379 SVEP1Q4LDE5 3571 aa12.06□□□□□ -0.48
HDHD3-201ENST00000238379 CSPG4Q6UVK1 2322 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 ITPR2Q14571 2701 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 TRAV1-1A0A0B4J248 108 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 SOX15O60248 233 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 HLA-DRB1P01911 266 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 MBP02144 154 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 CTRB1P17538 263 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 CCL20P78556 96 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 CTRB2Q6GPI1 263 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 SSX7Q7RTT5 188 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 COMMD1Q8N668 190 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 ABHD5Q8WTS1 349 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 MBD3L1Q8WWY6 194 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 ARPC1AQ92747 370 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 SCRT1Q9BWW7 348 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 FAM96BQ9Y3D0 163 aa12.05□□□□□ -0.48
HDHD3-201ENST00000238379 PRRC2AP48634 2157 aaKnown RBP12.05□□□□□ -0.48
HDHD3-201ENST00000238379 IGHV7-81A0A0B4J1V7 117 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 A0A1B0GV50 99 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 CRYGCP07315 174 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 RAB31Q13636 194 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 MIC13Q5XKP0 118 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 BPIFCQ8NFQ6 507 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 OR10G4Q8NGN3 311 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 OR10G9Q8NGN4 311 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 OR10G7Q8NGN6 311 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 MISP3Q96FF7 219 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 FASNP49327 2511 aaKnown RBP12.04□□□□□ -0.48
HDHD3-201ENST00000238379 CCDC168Q8NDH2 2452 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 BTBD17A6NE02 478 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 YIF1AO95070 293 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 FBP1P09467 338 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 M6PRP20645 277 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 RPL29P47914 159 aaKnown RBP12.04□□□□□ -0.48
HDHD3-201ENST00000238379 ASPHD1Q5U4P2 390 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 LFNGQ8NES3 379 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 WFDC11Q8NEX6 87 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 SLC35E1Q96K37 410 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 LINC00052Q96N35 136 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 RBM14Q96PK6 669 aaKnown RBP12.04□□□□□ -0.48
HDHD3-201ENST00000238379 SSX3Q99909 188 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 RASL11BQ9BPW5 248 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 WNT10AQ9GZT5 417 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 MRPL36Q9P0J6 103 aaKnown RBP12.04□□□□□ -0.48
HDHD3-201ENST00000238379 PXMP4Q9Y6I8 212 aa12.04□□□□□ -0.48
HDHD3-201ENST00000238379 CORTO00230 105 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 IGHV3-48P01763 117 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 CD5P06127 495 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 EGR2P11161 476 aaPredicted RBP12.03□□□□□ -0.48
HDHD3-201ENST00000238379 PRR20EP86478 221 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 PRR20CP86479 221 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 PRR20DP86480 221 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 PRR20BP86481 221 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 PRR20AP86496 221 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 ACOT6Q3I5F7 207 aaPredicted RBP12.03□□□□□ -0.48
HDHD3-201ENST00000238379 GCSAMLQ5JQS6 135 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 ACY3Q96HD9 319 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 FAM210AQ96ND0 272 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 HSPB9Q9BQS6 159 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 TMEM231Q9H6L2 316 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 KCNIP2Q9NS61 270 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 SLC45A2Q9UMX9 530 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 ITPR3Q14573 2671 aa12.03□□□□□ -0.48
HDHD3-201ENST00000238379 KRBOX1C9JBD0 128 aa12.02□□□□□ -0.48
HDHD3-201ENST00000238379 HBE1P02100 147 aa12.02□□□□□ -0.48
HDHD3-201ENST00000238379 ZP3P21754 424 aa12.02□□□□□ -0.48
HDHD3-201ENST00000238379 ETFRF1Q6IPR1 90 aa12.02□□□□□ -0.48
HDHD3-201ENST00000238379 LCN15Q6UWW0 184 aa12.02□□□□□ -0.48
HDHD3-201ENST00000238379 TMEM219Q86XT9 240 aa12.02□□□□□ -0.48
HDHD3-201ENST00000238379 STPG3Q8N7X2 389 aa12.02□□□□□ -0.48
HDHD3-201ENST00000238379 C5orf56Q8N8D9 126 aa12.02□□□□□ -0.48
HDHD3-201ENST00000238379 SLC25A33Q9BSK2 321 aa12.02□□□□□ -0.48
HDHD3-201ENST00000238379 NPIPB5A8MRT5 1133 aa12.02□□□□□ -0.49
HDHD3-201ENST00000238379 LINC00869P0C866 280 aa12.02□□□□□ -0.49
HDHD3-201ENST00000238379 OR10J1P30954 320 aa12.02□□□□□ -0.49
HDHD3-201ENST00000238379 BPIFB3P59826 476 aa12.02□□□□□ -0.49
HDHD3-201ENST00000238379 NPIPB3Q92617 1050 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms