RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 C2orf16Q68DN1 1984 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 E9PLD3 99 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 NTF4P34130 210 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 GPR12P47775 334 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 SPINK9Q5DT21 86 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 C10orf128Q5T292 105 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 Q6ZUT4 128 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 TMEM116Q8NCL8 245 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 IL1F10Q8WWZ1 152 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 PIGCQ92535 297 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 SNRNP40Q96DI7 357 aaKnown RBP10.7□□□□□ -0.7
MSH2-201ENST00000233146 VWCEQ96DN2 955 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 PRO0461Q9UI25 63 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 DUSP13Q9UII6 198 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 NOTCH4Q99466 2003 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 RP1P56715 2156 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 TRIOO75962 3097 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 A0A1W2PP55 124 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 C2CD4DB7Z1M9 353 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 GABRG2P18507 467 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 CST6Q15828 149 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 LILRA6Q6PI73 481 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 PATE1Q8WXA2 126 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 ZNF747Q9BV97 191 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 CHRNA10Q9GZZ6 450 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 HIGD1CA8MV81 97 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 PRR31Q5SQ13 230 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 SYT8Q8NBV8 401 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 MBNL3Q9NUK0 354 aaKnown RBP10.69□□□□□ -0.7
MSH2-201ENST00000233146 EXPH5Q8NEV8 1989 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 A0A1W2PQU0 124 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 CT45A6P0DMU7 189 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 CT45A5P0DMU8 189 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 CT45A7P0DMV0 189 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 CD24P25063 80 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 CT45A1Q5HYN5 189 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 PIP4P2Q8N4L2 257 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 CT45A3Q8NHU0 189 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 C1orf159Q96HA4 380 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 C1QTNF4Q9BXJ3 329 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 DEC1Q9P2X7 70 aa10.69□□□□□ -0.7
MSH2-201ENST00000233146 TRIOBPQ9H2D6 2365 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 hCG_38984A0A1B0GV85 526 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 XGP55808 180 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 TMPRSS3P57727 454 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 PPP1R32Q7Z5V6 425 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 TSACCQ96A04 125 aaPredicted RBP10.68□□□□□ -0.7
MSH2-201ENST00000233146 METTL7AQ9H8H3 244 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 RALYQ9UKM9 306 aaKnown RBP10.68□□□□□ -0.7
MSH2-201ENST00000233146 ARL3P36405 182 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 FXYD2P54710 66 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 ZNF441Q8N8Z8 693 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 SSMEM1Q8WWF3 244 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 TMEM167BQ9NRX6 74 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 SLC25A10Q9UBX3 287 aaPredicted RBP10.68□□□□□ -0.7
MSH2-201ENST00000233146 COL5A1P20908 1838 aaPredicted RBP10.68□□□□□ -0.7
MSH2-201ENST00000233146 A0A1W2PNR3 127 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 GGTLC3B5MD39 225 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 H3BMG7 143 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 SUMO3P55854 103 aaPredicted RBP10.68□□□□□ -0.7
MSH2-201ENST00000233146 ESPL1Q14674 2120 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 GAB4Q2WGN9 574 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 LINC00696Q6ZRV3 163 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 ZADH2Q8N4Q0 377 aa10.68□□□□□ -0.7
MSH2-201ENST00000233146 LSM4Q9Y4Z0 139 aaKnown RBP10.68□□□□□ -0.7
MSH2-201ENST00000233146 TEX50A0A1B0GTY4 177 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 MANSC4A6NHS7 340 aaPredicted RBP10.67□□□□□ -0.7
MSH2-201ENST00000233146 MYF5P13349 255 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 ZNF138P52744 262 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 HBBP68871 147 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 PSG5Q15238 335 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 GAGE13Q4V321 117 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 TRAT1Q6PIZ9 186 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 TMUB1Q9BVT8 246 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 HEYLQ9NQ87 328 aaPredicted RBP10.67□□□□□ -0.7
MSH2-201ENST00000233146 PRSS46E5RG02 174 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 SYNGR3O43761 229 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 ZNF816Q0VGE8 651 aaPredicted RBP10.67□□□□□ -0.7
MSH2-201ENST00000233146 FOXI1Q12951 378 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 ZNF146Q15072 292 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 PLPPR2Q96GM1 343 aa10.67□□□□□ -0.7
MSH2-201ENST00000233146 IGKV3D-11A0A0A0MRZ8 115 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 MGST3O14880 152 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 NHLRC4P0CG21 123 aaPredicted RBP10.66□□□□□ -0.7
MSH2-201ENST00000233146 C2orf27AQ580R0 203 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 OSR1Q8TAX0 266 aaPredicted RBP10.66□□□□□ -0.7
MSH2-201ENST00000233146 ZNF296Q8WUU4 475 aaPredicted RBP10.66□□□□□ -0.7
MSH2-201ENST00000233146 OTOL1A6NHN0 477 aaPredicted RBP10.66□□□□□ -0.7
MSH2-201ENST00000233146 TMEM150CB9EJG8 249 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 K7ERJ3 54 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 TM4SF20Q53R12 229 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 MIR17HGQ75NE6 70 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 KLK10O43240 276 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 CFHR2P36980 270 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 ID1P41134 155 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 FHL3Q13643 280 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 YAE1D1Q9NRH1 226 aa10.66□□□□□ -0.7
MSH2-201ENST00000233146 A8MWL6 223 aa10.65□□□□□ -0.7
MSH2-201ENST00000233146 SLC25A53Q5H9E4 307 aa10.65□□□□□ -0.7
MSH2-201ENST00000233146 BCL6BQ8N143 479 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms