RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 GLMPQ8WWB7 406 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 DPM3Q9P2X0 92 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 H3BUT2 72 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 CD24P25063 80 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 CXCL1P09341 107 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 SFTA2Q6UW10 78 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 IMMP1LQ96LU5 166 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 ALKBH7Q9BT30 221 aaPredicted RBP11.18□□□□□ -0.62
NEK4-201ENST00000233027 SOX21Q9Y651 276 aaPredicted RBP11.18□□□□□ -0.62
NEK4-201ENST00000233027 DOCK4Q8N1I0 1966 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 UPK2O00526 184 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 CA1P00915 261 aaPredicted RBP11.18□□□□□ -0.62
NEK4-201ENST00000233027 RNASEH2CQ8TDP1 164 aaKnown RBP11.18□□□□□ -0.62
NEK4-201ENST00000233027 TNFRSF18Q9Y5U5 241 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 C15orf61A6NNL5 157 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 NAPSAO96009 420 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 GDF15Q99988 308 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 FNDC4Q9H6D8 234 aaPredicted RBP11.17□□□□□ -0.62
NEK4-201ENST00000233027 FOXD3Q9UJU5 478 aaPredicted RBP11.17□□□□□ -0.62
NEK4-201ENST00000233027 LAMTOR2Q9Y2Q5 125 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 LCTP09848 1927 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 GREB1Q4ZG55 1949 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 UBE2CO00762 179 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 ORMDL3Q8N138 153 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 COPS9Q8WXC6 57 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 A6NNC1 897 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 MORN2Q502X0 79 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 OCC1Q8TAD7 63 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 RFNGQ9Y644 331 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 WNK3Q9BYP7 1800 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 CCL1P22362 96 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 RTN4RL2Q86UN3 420 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 DOCK3Q8IZD9 2030 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 ZCCHC24Q8N2G6 241 aaKnown RBP11.17□□□□□ -0.62
NEK4-201ENST00000233027 SCN10AQ9Y5Y9 1956 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 TRAV9-1A0A075B6T8 112 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 IGKV3D-20A0A0C4DH25 116 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 PINLYPA6NC86 204 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 ATP5LO75964 103 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 DNAL4O96015 105 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 NRN1LQ496H8 165 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 PRDM13Q9H4Q3 707 aa11.17□□□□□ -0.62
NEK4-201ENST00000233027 SMAD7O15105 426 aaKnown RBP11.16□□□□□ -0.62
NEK4-201ENST00000233027 EFEMP2O95967 443 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 IGHV3-11P01762 117 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 MEF2CQ06413 473 aaPredicted RBP11.16□□□□□ -0.62
NEK4-201ENST00000233027 HEPN1Q6WQI6 88 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 FOXH1O75593 365 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 MRPL14Q6P1L8 145 aaKnown RBP11.16□□□□□ -0.62
NEK4-201ENST00000233027 SEMA5BQ9P283 1151 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 LINC00312Q9Y6C7 94 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 DUX3Q96PT4 197 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 OTORQ9NRC9 128 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 TMEM144Q7Z5S9 345 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 ITLN2Q8WWU7 325 aaPredicted RBP11.16□□□□□ -0.62
NEK4-201ENST00000233027 NEUROG1Q92886 237 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 NUDT11Q96G61 164 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 GP6Q9HCN6 339 aa11.16□□□□□ -0.62
NEK4-201ENST00000233027 EVI2AP22794 236 aa11.15□□□□□ -0.62
NEK4-201ENST00000233027 PPIFP30405 207 aaKnown RBP11.15□□□□□ -0.62
NEK4-201ENST00000233027 MDC1Q14676 2089 aaKnown RBP11.15□□□□□ -0.62
NEK4-201ENST00000233027 CIARTQ8N365 385 aaPredicted RBP11.15□□□□□ -0.62
NEK4-201ENST00000233027 FAM89BQ8N5H3 189 aa11.15□□□□□ -0.62
NEK4-201ENST00000233027 CACNG8Q8WXS5 425 aa11.15□□□□□ -0.62
NEK4-201ENST00000233027 TRAV5A0A0B4J249 113 aa11.15□□□□□ -0.62
NEK4-201ENST00000233027 C1orf162Q8NEQ5 155 aaPredicted RBP11.15□□□□□ -0.62
NEK4-201ENST00000233027 IGKV1-12A0A0C4DH73 117 aa11.15□□□□□ -0.62
NEK4-201ENST00000233027 IGKV1D-12P01611 117 aa11.15□□□□□ -0.62
NEK4-201ENST00000233027 LINC00614P0C842 121 aa11.15□□□□□ -0.62
NEK4-201ENST00000233027 KIR3DL3Q8N743 410 aa11.15□□□□□ -0.62
NEK4-201ENST00000233027 EFNB3Q15768 340 aa11.15□□□□□ -0.63
NEK4-201ENST00000233027 C5orf24Q7Z6I8 188 aa11.15□□□□□ -0.63
NEK4-201ENST00000233027 GLRX5Q86SX6 157 aa11.15□□□□□ -0.63
NEK4-201ENST00000233027 C10orf126Q8N4M7 172 aa11.15□□□□□ -0.63
NEK4-201ENST00000233027 YPEL1O60688 119 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 YPEL2Q96QA6 119 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 NDUFAF3Q9BU61 184 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 DERL1Q9BUN8 251 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 CYTL1Q9NRR1 136 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 EPDR1Q9UM22 224 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 LOC285556D6RIA3 1793 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 PAPPA-AS1Q5QFB9 102 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.14□□□□□ -0.63
NEK4-201ENST00000233027 OR10W1Q8NGF6 305 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 JKAMPQ9P055 326 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 TMEM50AO95807 157 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 LINC00271P0C7V0 271 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 HIST1H2BLQ99880 126 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 C17orf100A8MU93 164 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 MST1P26927 711 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 MRPS16Q9Y3D3 137 aaKnown RBP11.14□□□□□ -0.63
NEK4-201ENST00000233027 SELENOKQ9Y6D0 94 aa11.14□□□□□ -0.63
NEK4-201ENST00000233027 ID3Q02535 119 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 HGFACQ04756 655 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 C2orf88Q9BSF0 95 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 FBLN5Q9UBX5 448 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 CLDN16Q9Y5I7 305 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 CASP8AP2Q9UKL3 1982 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 OR10J3Q5JRS4 329 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms