RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SAMD10Q9BYL1 202 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 RNASE7Q9H1E1 156 aaKnown RBP10.83□□□□□ -0.68
SRP54-201ENST00000216774 NDUFA4L2Q9NRX3 87 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 NAT8BQ9UHF3 227 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 SMIM27A0A1W2PRY6 76 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 NKX6-3A6NJ46 265 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 FRMD6-AS1P0C7T7 363 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 GATA2P23769 480 aaPredicted RBP10.82□□□□□ -0.68
SRP54-201ENST00000216774 SUMO1P63165 101 aaKnown RBP10.82□□□□□ -0.68
SRP54-201ENST00000216774 MEF2CQ06413 473 aaPredicted RBP10.82□□□□□ -0.68
SRP54-201ENST00000216774 TMEM183BQ1AE95 376 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 DEFB124Q8NES8 71 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 COMMD5Q9GZQ3 224 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 PSMB11A5LHX3 300 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 M0QZK8 103 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 IGLV2-8P01709 118 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 BRS3P32247 399 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 ERHP84090 104 aaKnown RBP10.82□□□□□ -0.68
SRP54-201ENST00000216774 TMEM136Q6ZRR5 245 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 NUP37Q8NFH4 326 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 HARBI1Q96MB7 349 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 GNB4Q9HAV0 340 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 CDC42EP3Q9UKI2 254 aa10.82□□□□□ -0.68
SRP54-201ENST00000216774 RAI1Q7Z5J4 1906 aaPredicted RBP10.81□□□□□ -0.68
SRP54-201ENST00000216774 SPAARA0A1B0GVQ0 90 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 HLA-DQA1P01909 254 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 AMY1AP04745 511 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 CD40P25942 277 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 RPL8P62917 257 aaKnown RBP10.81□□□□□ -0.68
SRP54-201ENST00000216774 TMEM177Q53S58 311 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 IBA57Q5T440 356 aaKnown RBP10.81□□□□□ -0.68
SRP54-201ENST00000216774 RPRMLQ8N4K4 120 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 SIGLECL1Q8N7X8 197 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 OR5AN1Q8NGI8 311 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 OR4A5Q8NH83 315 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 FAM167A-AS1Q96KT0 104 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 MIEN1Q9BRT3 115 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 DNAJC4Q9NNZ3 241 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 PARD6AQ9NPB6 346 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 A0A1W2PN81 502 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 H0YJW9 148 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 CD33P20138 364 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 USF1P22415 310 aaPredicted RBP10.81□□□□□ -0.68
SRP54-201ENST00000216774 OR10W1Q8NGF6 305 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 RND1Q92730 232 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 SLC25A2Q9BXI2 301 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 MRPL20Q9BYC9 149 aaKnown RBP10.81□□□□□ -0.68
SRP54-201ENST00000216774 ZNRD1Q9P1U0 126 aa10.81□□□□□ -0.68
SRP54-201ENST00000216774 F2Z2F3 143 aa10.8□□□□□ -0.68
SRP54-201ENST00000216774 GPX1P07203 203 aa10.8□□□□□ -0.68
SRP54-201ENST00000216774 TNFRSF1AP19438 455 aa10.8□□□□□ -0.68
SRP54-201ENST00000216774 CDKN1AP38936 164 aa10.8□□□□□ -0.68
SRP54-201ENST00000216774 TDGF1P3P51864 188 aa10.8□□□□□ -0.68
SRP54-201ENST00000216774 UBE2L3P68036 154 aaKnown RBP10.8□□□□□ -0.68
SRP54-201ENST00000216774 FXYD3Q14802 87 aa10.8□□□□□ -0.68
SRP54-201ENST00000216774 MLANAQ16655 118 aa10.8□□□□□ -0.68
SRP54-201ENST00000216774 SNRNP40Q96DI7 357 aaKnown RBP10.8□□□□□ -0.68
SRP54-201ENST00000216774 ZNF586Q9NXT0 402 aa10.8□□□□□ -0.68
SRP54-201ENST00000216774 CEACAM8P31997 349 aaPredicted RBP10.79□□□□□ -0.68
SRP54-201ENST00000216774 FAM71F2Q6NXP2 309 aa10.79□□□□□ -0.68
SRP54-201ENST00000216774 VSTM2AQ8TAG5 236 aa10.79□□□□□ -0.68
SRP54-201ENST00000216774 FLYWCH2Q96CP2 140 aaKnown RBP10.79□□□□□ -0.68
SRP54-201ENST00000216774 KCNS1Q96KK3 526 aa10.79□□□□□ -0.68
SRP54-201ENST00000216774 VAMP8Q9BV40 100 aa10.79□□□□□ -0.68
SRP54-201ENST00000216774 MGST1P10620 155 aaKnown RBP10.79□□□□□ -0.68
SRP54-201ENST00000216774 CHRNB4P30926 498 aa10.79□□□□□ -0.68
SRP54-201ENST00000216774 RASL11AQ6T310 242 aa10.79□□□□□ -0.68
SRP54-201ENST00000216774 OR1L4Q8NGR5 311 aa10.79□□□□□ -0.68
SRP54-201ENST00000216774 TMEM167AQ8TBQ9 72 aa10.79□□□□□ -0.68
SRP54-201ENST00000216774 SPENQ96T58 3664 aaKnown RBP10.79□□□□□ -0.68
SRP54-201ENST00000216774 IZUMO1RA6ND01 250 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 COMPP49747 757 aaPredicted RBP10.78□□□□□ -0.68
SRP54-201ENST00000216774 ZNF705AQ6ZN79 300 aaPredicted RBP10.78□□□□□ -0.68
SRP54-201ENST00000216774 Q6ZS92 163 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 FAM231DQ6ZW35 169 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 PDPNQ86YL7 162 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 OR4C13Q8NGP0 309 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 OR2T6Q8NHC8 308 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 VN1R17PQ8TDU5 208 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 WIPF2Q8TF74 440 aaPredicted RBP10.78□□□□□ -0.68
SRP54-201ENST00000216774 ZNF430Q9H8G1 570 aaPredicted RBP10.78□□□□□ -0.68
SRP54-201ENST00000216774 CADP27708 2225 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 COX7A2P2O60397 106 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 SUB1P53999 127 aaKnown RBP eCLIP10.78□□□□□ -0.68
SRP54-201ENST00000216774 TCL1AP56279 114 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 BPIFB3P59826 476 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 FAM27E3Q08E93 113 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 TDRG1Q3Y452 100 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 TMEM108Q6UXF1 575 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 C8orf31Q8N9H6 132 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 DCAF16Q9NXF7 216 aa10.78□□□□□ -0.68
SRP54-201ENST00000216774 TBL2Q9Y4P3 447 aaKnown RBP10.78□□□□□ -0.68
SRP54-201ENST00000216774 AMMECR1Q9Y4X0 333 aaPredicted RBP10.78□□□□□ -0.68
SRP54-201ENST00000216774 TRAV5A0A0B4J249 113 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 BMPR1BO00238 502 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 SPINK4O60575 86 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 CRYABP02511 175 aaKnown RBP10.77□□□□□ -0.69
SRP54-201ENST00000216774 REG1AP05451 166 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 CCL8P80075 99 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 MORN5Q5VZ52 161 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms